fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G11400 ARID/BRIGHT DNA-binding domain;ELM2 domain protein (.1)

>AT4G11400.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 1467
BglII A|GATCT 1009
EcoRV GAT|ATC 842
HindIII A|AGCTT 95, 1229
NdeI CA|TATG 29, 496
PstI CTGCA|G 143, 1064
PvuII CAG|CTG 1287
SacI GAGCT|C 963, 1294, 1360
StyI C|C[AT][AT]GG 644
XbaI T|CTAGA 1075


Click here to view TAIR data

>AT4G11400.1 length:1722
ATGGGAAGTT TTAATGATAC TTCATGTTCA TATGTTGATG TTGAGATTAA 
50
GTATGTTGAT GAATGTGAGG AGAGGTTAAG GAGATTGTTT GATCAAGCTT 
100
TGTTGGTTTT TCTTGAGGAA GAGGGTAGTA TAAAGCCTCT CCCTGCAGTT 
150
ATAGGTGATG GCAAAAATGT TGATTTGTTT AAGCTGTTTG TATTGGTGAG 
200
GGAGAGGGAA GGGTTTGATA CTGTGTCTAG GAAAAGGTTG TGGGAAGTAG 
250
TGGCTGAGAA GTTAGGCTTT GATTGTTCAC TGGTTCCTTC TTTGATATTG 
300
ATTTACTTGA AGTATTTGAA CCGGATGGAG AAATGGGCGG TGGAGGAATC 
350
TAGGATTGTG AATTGGGATA ATAAGGATAG TGAAAAGAAA GGGTGTTATA 
400
GTGGTATGTT GCATGAGTTA GGGAATGGTT TTAAGAGTTT GTTGGACAAT 
450
GGGAAGTGTC AGAAACGTAA CAGAGCTGTT GCGTTTGGTT GTAACCATAT 
500
GGAAGAGTCG TGTTCAGAGT TTGATAGGTC TAGGAAGAGG TTTAGAGAGA 
550
GTGATGATGA TGATAAAGGA GTAGGACTGT CTAGTGTTGT TATTAGGGAG 
600
GAGACTGTTG TATGTGCTGT GGAAGAAGGT TTGTCGGATT TTTCCTTGGA 
650
GAAGCGAGAC GATTTACCGG GAATGTTGAA GTGGCTGGCT TTGGTTGCAA 
700
CATCTCCTCA TGATCCTGCC ATTGGAGTTA TACCGCATAG TTCAAAATGG 
750
AAGCAGTATA ACGGTAACAA GTGTTGGCTC CAAGTGGCTA GAGCAAAAAA 
800
CTCTTTGCTG GTTCAAAGAG ACAATGCTGA ACTCAGATAT AGATATCATC 
850
CATTTCGGGG TCACCAAAAT ATACATCATC CGTCTATGTA TGAAGATGAT 
900
CGAAAGTCGA TAGGGAGGTT AAGATACAGC ATAAGACCTC CAAATTTATC 
950
CAAACACTGT TCGAGCTCGT GTTGCAATGG AAGCAGTTTG GTCTCTCTAT 
1000
CTAAATCAAG ATCTACCAAA TGCAGAAAAC TGACGATCAT TGCTTCTGAG 
1050
AGAGCAGGCC TTACTGCAGG AACATCTAGA GCCAGAAAGC GAAACAAAGC 
1100
AGAGATCCCG AGAAGGTGTA TTAAAGTAGG ACATCAACAC CAAGCCCAAG 
1150
TGGATGAATG GACAGAGTCC GGTGTAGATA GCGATAGTAA ATGGTTAGGA 
1200
ACCCGTATAT GGCCGCCAGA AAATAGTGAA GCTTTAGATC AGACGCTTGG 
1250
AAATGATTTA GTTGGAAAAG GAAGGCCAGA TTCTTGCAGC TGTGAGCTCT 
1300
CTGGTTTTGT GGAATGCACT AGGTTGCACA TTGCAGAGAA GAGAATGGAA 
1350
CTGAAACGTG AGCTCGGCGA TGACTTTTTC CATTGGAGAT TCAATCAAAT 
1400
GGGAGAAGAA GTGTGTCTAA GATGGACAGA AGAAGAAGAG AAGAGGTTTA 
1450
AAGACATGAT CATCGCGGAT CCTCAATCTT TCTGGACAAA TGCGGCAAAA 
1500
AATTTCCCAA AGAAGAAGAG AGAGGAGCTT GTGAGTTACT ACTTCAACGT 
1550
CTTCTTGATT AACAGAAGAC GGTATCAGAA CCGTGTGACT CCAAAAAGTA 
1600
TAGACAGTGA TGACGAAGGA GCGTTTGGTA GTGTTGGTGG CAGTTTTGGT 
1650
CGTGATGCTG TTACTTCGTC TGGTTCAGAT GTTATGATCT GTGCTCAGAA 
1700
TCGTCAGTGT GAGGACTACT GA
1750

>AT4G11400.1 longest ORF length:573
MGSFNDTSCS YVDVEIKYVD ECEERLRRLF DQALLVFLEE EGSIKPLPAV 
50
IGDGKNVDLF KLFVLVRERE GFDTVSRKRL WEVVAEKLGF DCSLVPSLIL 
100
IYLKYLNRME KWAVEESRIV NWDNKDSEKK GCYSGMLHEL GNGFKSLLDN 
150
GKCQKRNRAV AFGCNHMEES CSEFDRSRKR FRESDDDDKG VGLSSVVIRE 
200
ETVVCAVEEG LSDFSLEKRD DLPGMLKWLA LVATSPHDPA IGVIPHSSKW 
250
KQYNGNKCWL QVARAKNSLL VQRDNAELRY RYHPFRGHQN IHHPSMYEDD 
300
RKSIGRLRYS IRPPNLSKHC SSSCCNGSSL VSLSKSRSTK CRKLTIIASE 
350
RAGLTAGTSR ARKRNKAEIP RRCIKVGHQH QAQVDEWTES GVDSDSKWLG 
400
TRIWPPENSE ALDQTLGNDL VGKGRPDSCS CELSGFVECT RLHIAEKRME 
450
LKRELGDDFF HWRFNQMGEE VCLRWTEEEE KRFKDMIIAD PQSFWTNAAK 
500
NFPKKKREEL VSYYFNVFLI NRRRYQNRVT PKSIDSDDEG AFGSVGGSFG 
550
RDAVTSSGSD VMICAQNRQC EDY
600