fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G11660 AT-HSFB2B, HSFB2B HEAT SHOCK TRANSCRIPTION FACTOR B2B, winged-helix DNA-binding transcription factor family protein (.1)

>AT4G11660.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 288, 843
EcoRI G|AATTC 277
HindIII A|AGCTT 745
PstI CTGCA|G 479, 998
PvuII CAG|CTG 272, 524
StyI C|C[AT][AT]GG 937
XhoI C|TCGAG 324


Click here to view TAIR data

>AT4G11660.1 length:1134
ATGCCGGGGG AACAAACCGG AGAAACTCCG ACGGTGGCCG GAGTTGGCGG 
50
CGGTGGAGCT GGTTGTAGCG CCGGGAATAG TGGTGGAAGT AGTGGATGTG 
100
GTGCTGGTGG TGGCGGTGGT GGTAGTGGTG GAGGTGGTGG CGGAGGAGGA 
150
GATTCACAGA GGTCAATTCC GACGCCGTTT TTGACGAAAA CGTATCAGCT 
200
TGTGGAAGAT CCGGTTTACG ACGAATTGAT CTCGTGGAAC GAAGATGGAA 
250
CCACTTTTAT TGTGTGGCGA CCAGCTGAAT TCGCTAGAGA TCTTCTTCCC 
300
AAATACTTCA AACATAATAA CTTCTCGAGT TTTGTTCGTC AGCTCAATAC 
350
TTACGGATTT CGAAAAGTAG TTCCAGATCG TTGGGAGTTT TCTAATGATT 
400
GTTTTAAGAG AGGTGAGAAG ATTCTGCTTC GGGATATTCA ACGGCGGAAA 
450
ATCTCTCAGC CTGCTATGGC CGCGGCTGCT GCAGCGGCGG CGGCAGCCGT 
500
AGCGGCTTCG GCTGTTACAG TAGCAGCTGT TCCTGTTGTA GCTCATATTG 
550
TTTCTCCATC GAACTCTGGA GAAGAACAGG TTATATCGTC TAATTCTTCG 
600
CCTGCGGCTG CTGCTGCTGC TATAGGAGGA GTGGTTGGTG GTGGTTCTTT 
650
GCAGAGGACA ACGAGCTGCA CCACTGCACC AGAGCTGGTT GAGGAGAATG 
700
AGCGATTGAG GAAAGATAAT GAGCGATTGA GGAAAGAGAT GACAAAGCTT 
750
AAAGGATTGT ATGCGAATAT CTACACATTA ATGGCGAATT TCACACCGGG 
800
TCAAGAAGAT TGTGCGCATT TGTTACCTGA AGGGAAACCT TTAGATCTTT 
850
TACCGGAGAG ACAAGAGATG AGTGAAGCCA TTATGGCTTC TGAAATAGAG 
900
ACAGGGATTG GTCTGAAACT TGGTGAGGAT TTGACTCCAA GGTTGTTTGG 
950
GGTTTCTATT GGGGTCAAGC GAGCTAGAAG AGAAGAAGAA TTGGGTGCTG 
1000
CAGAGGAAGA AGATGATGAT AGACGAGAAG CTGCTGCCCA AGAGGGAGAA 
1050
CAAAGTTCTG ATGTTAAGGC AGAGCCAATG GAGGAGAATA ACTCCGGTAA 
1100
CCATAATGGG TCGTGGCTTG AACTCGGAAA ATGA
1150

>AT4G11660.1 longest ORF length:377
MPGEQTGETP TVAGVGGGGA GCSAGNSGGS SGCGAGGGGG GSGGGGGGGG 
50
DSQRSIPTPF LTKTYQLVED PVYDELISWN EDGTTFIVWR PAEFARDLLP 
100
KYFKHNNFSS FVRQLNTYGF RKVVPDRWEF SNDCFKRGEK ILLRDIQRRK 
150
ISQPAMAAAA AAAAAAVAAS AVTVAAVPVV AHIVSPSNSG EEQVISSNSS 
200
PAAAAAAIGG VVGGGSLQRT TSCTTAPELV EENERLRKDN ERLRKEMTKL 
250
KGLYANIYTL MANFTPGQED CAHLLPEGKP LDLLPERQEM SEAIMASEIE 
300
TGIGLKLGED LTPRLFGVSI GVKRARREEE LGAAEEEDDD RREAAAQEGE 
350
QSSDVKAEPM EENNSGNHNG SWLELGK
400