fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G12240 zinc finger (C2H2 type) family protein (.1)

>AT4G12240.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
XbaI T|CTAGA 135


Click here to view TAIR data

>AT4G12240.1 length:1095
ATGTTTTCAA GATTTGTCCT AAAAAGTTGG AGACCTAAAA CCCAAACCAC 
50
ATCTCTCAAT TCAATCAAAG GTTTTAGCTT TAGCTCTAGC TCGATAAACC 
100
CTAAACCCAA AATCCGAGTA GGGGTTTGGT GGGATCTAGA CAACAAACCA 
150
CCAGCCTCTT TCCCGCCTTA CGACGCCGCC GTCAAGCTCC GAACCGCCGC 
200
GTCGTCTTTC GGAACCGTGA AGCTAATGAT GGCGTATGCG AATCGTCACG 
250
CCTTTAGCTA CGTTCCTTTA GAAGTTCGAG AACAGAGGAA AGATAGGAAA 
300
TTGCTAAACA AATTAGAGAA CAAAGGTTTA GTTAAACCAC CGGAGCCTTA 
350
CTTCTGCGGT GTTTGTGACC GGAGATTCTA CACTAACGAG AAGCTAATTA 
400
ATCATTTCAA GCAGATTCAT GAGACAGAGA ATCAGAAACG TATGAGACAG 
450
ATTGAATCTT CGAAAGGACA TCGAAGAGTG AGACTTGTGG CTAAGTATTC 
500
GATGAAGATT GAGAAGTATA AAAGAGCGGC GAGGAATGTT TTGACTCCGA 
550
AGGAAGGTTA CGGTTTAGCT GATGAGCTGA AACGAGCTGG TTTTTGGGTG 
600
AAGATGGTTA GTGATAAGCC AGATGCTGCT GATAAGGCGT TGAAGGAACA 
650
TTTGGTTGAA GTGATGGATA AGAGAGAAGT GGAGTGTGTT GTTTTAGTGT 
700
CTGATGATTC TGATTTTGCG GGGATTTTGT GGGAAGCTAA GGAGAGGTGT 
750
TTGAGGACGG TTGTGATTGG AGATTCGAAC GAAGGTGCGC TGAAGCGAGT 
800
AGCGGATGTT GCGTATTCGT GGAAGGAAGT GACGATGGGG AAGGCGAAGA 
850
AGGAAGTTGA GAAAGTTGTG GGGAAGTGGA AGGATAGAGA TGTGTTGAAG 
900
AAGTTGGAGT GGACTTATGA TCCTGCTTTG GAGAAAGAGA GAGGTGGTTC 
950
TTGCGGTGTT TGGGATTACG AGTTTGATTA TGATGATGAG ATTGAGAATG 
1000
GAACAGAGGT GGAACCTGTG GAGATTGGTG ATGGTGTTGA CTGGTGGAAG 
1050
ATCGATACTG AAGATGGTGT TGGATCTTCA AGAACTTGTC GATAA
1100

>AT4G12240.1 longest ORF length:364
MFSRFVLKSW RPKTQTTSLN SIKGFSFSSS SINPKPKIRV GVWWDLDNKP 
50
PASFPPYDAA VKLRTAASSF GTVKLMMAYA NRHAFSYVPL EVREQRKDRK 
100
LLNKLENKGL VKPPEPYFCG VCDRRFYTNE KLINHFKQIH ETENQKRMRQ 
150
IESSKGHRRV RLVAKYSMKI EKYKRAARNV LTPKEGYGLA DELKRAGFWV 
200
KMVSDKPDAA DKALKEHLVE VMDKREVECV VLVSDDSDFA GILWEAKERC 
250
LRTVVIGDSN EGALKRVADV AYSWKEVTMG KAKKEVEKVV GKWKDRDVLK 
300
KLEWTYDPAL EKERGGSCGV WDYEFDYDDE IENGTEVEPV EIGDGVDWWK 
350
IDTEDGVGSS RTCR
400