fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G12350 ATMYB42 myb domain protein 42 (.1)

>AT4G12350.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 816
PstI CTGCA|G 671
PvuII CAG|CTG 668
StyI C|C[AT][AT]GG 816


Click here to view TAIR data

>AT4G12350.1 length:861
ATGGGAAGGC AGCCATGTTG TGACAAGCTC ATGGTGAAGA AGGGGCCGTG 
50
GACGGCGGAG GAAGACAAGA AACTGATAAA CTTTATCTTG ACCAACGGCC 
100
ACTGTTGCTG GAGGGCTTTG CCGAAGCTGG CCGGTCTCCG TCGCTGTGGG 
150
AAGAGCTGCC GTCTACGGTG GACCAATTAT CTCCGACCTG ACTTGAAGAG 
200
AGGTCTTCTC TCCGACGCCG AGGAACAGCT TGTCATCGAC CTTCATGCTC 
250
TTCTCGGCAA CAGATGGTCC AAGATCGCTG CAAGATTACC AGGAAGAACA 
300
GACAACGAAA TAAAAAATCA TTGGAATACT CATATCAAGA AGAAGCTCCT 
350
TAAGATGGAA ATCGATCCTT CGACCCATCA ACCTTTAAAC AAAGTATTTA 
400
CCGATACAAA CTTAGTCGAT AAATCTGAAA CTTCATCGAA AGCCGACAAT 
450
GTAAATGATA ATAAAATCGT AGAGATCGAT GGGACAACGA CAAATACAAT 
500
AGATGATAGC ATTATCACTC ATCAAAATAG TTCAAATGAT GATTATGAAT 
550
TACTTGGTGA TATAATTCAT AATTATGGAG ATTTATTTAA TATTCTATGG 
600
ACCAACGATG AACCTCCTCT AGTCGATGAT GCATCATGGA GCAATCATAA 
650
CGTTGGTATT GGAGGAACAG CTGCAGTTGC AGCCTCAGAC AAGAACAACA 
700
CTGCTGCCGA GGAAGATTTC CCGGAAAGAT CATTTGAAAA ACAGAACGGC 
750
GAAAGTTGGA TGTTCTTGGA TTATTGCCAA GAATTTGGTG TTGAAGATTT 
800
TGGGTTCGAG TGTTACCATG GTTTTGGTCA AAGCTCCATG AAGACGGGTC 
850
ACAAGGACTA G
900

>AT4G12350.1 longest ORF length:286
MGRQPCCDKL MVKKGPWTAE EDKKLINFIL TNGHCCWRAL PKLAGLRRCG 
50
KSCRLRWTNY LRPDLKRGLL SDAEEQLVID LHALLGNRWS KIAARLPGRT 
100
DNEIKNHWNT HIKKKLLKME IDPSTHQPLN KVFTDTNLVD KSETSSKADN 
150
VNDNKIVEID GTTTNTIDDS IITHQNSSND DYELLGDIIH NYGDLFNILW 
200
TNDEPPLVDD ASWSNHNVGI GGTAAVAASD KNNTAAEEDF PERSFEKQNG 
250
ESWMFLDYCQ EFGVEDFGFE CYHGFGQSSM KTGHKD
300