Locus |
Common name |
Short description |
AT4G13040 |
|
Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT4G13040.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
244 |
NdeI
| CA|TATG |
217 |
SacI
| GAGCT|C |
499 |
SmaI
| CCC|GGG |
136 |
Click here to view TAIR data
>AT4G13040.1 length:681
ATGGTGAGCT TACGAAGACG TAGGCTATTG GGTCTTTGTT GTGGACCAAA | 50 |
TGGTTATGTG ACACCACTTC CATTTTTAAC TGCTGAGGAG ATGATCACTG | 100 |
GGATTCCAAA TCCTAATGCC AGAGCAGCTT ATAATCCCGG GCCAGCAGAA | 150 |
ACGGTTACAA CGGTTATCGT GGAGAAAAAG GCTATTGAAG AAAGAAGCCG | 200 |
AAGAACTCGG TCAAAACATA TGCATTTCAG GTCTGATTAT TCAGATATCT | 250 |
CACCGGTTAA TTCTGATTCC ATCTCACCAA AATACCAGCC GCCGAAACGA | 300 |
AGAAAGCAGC ATAGAAGAAA GCGAGTACAT AACCAAGAAC CATGTTTGAT | 350 |
GAGAGGAGTC TACTACAAAA ACATGAAATG GCAAGCCGCC ATTAAAGTCG | 400 |
AGAAGAAACA AATCCACTTA GGCACTTTCT CTTCTCAAGA AGAGGCTGCT | 450 |
CGCTTATACG ATAGGGCTGC TTTCATGTGT GGGAGGGAAC CGAACTTTGA | 500 |
GCTCTCGGAA GAAGTTATAC GAGAACTCAA ACAGCAAAGC TGGGAAGAGT | 550 |
TCTTGAATTG CACACGCCGA ACAATTACGA ACAAAAAACC AAAGAGTAGG | 600 |
ATAGAACATG AGGATACGAA GATCAATGCC AGCATGCCAC ATCAACCAGA | 650 |
AGAAGAAGAG CAAGATTCAG ACAAAATGTG A | 700 |
>AT4G13040.1 longest ORF length:226
MVSLRRRRLL GLCCGPNGYV TPLPFLTAEE MITGIPNPNA RAAYNPGPAE | 50 |
TVTTVIVEKK AIEERSRRTR SKHMHFRSDY SDISPVNSDS ISPKYQPPKR | 100 |
RKQHRRKRVH NQEPCLMRGV YYKNMKWQAA IKVEKKQIHL GTFSSQEEAA | 150 |
RLYDRAAFMC GREPNFELSE EVIRELKQQS WEEFLNCTRR TITNKKPKSR | 200 |
IEHEDTKINA SMPHQPEEEE QDSDKM | 250 |
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