Locus |
Common name |
Short description |
AT4G13040 |
|
Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT4G13040.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NdeI
| CA|TATG |
102 |
SacI
| GAGCT|C |
331 |
SmaI
| CCC|GGG |
21 |
Click here to view TAIR data
>AT4G13040.2 length:513
ATGCCAGAGC AGCTTATAAT CCCGGGCCAG CAGAAACGGT TACAACGGTT | 50 |
ATCGTGGAGA AAAAGGCTAT TGAAGAAAGA AGCCGAAGAA CTCGGTCAAA | 100 |
ACATATGCAT TTCAGACCAG CCGCCGAAAC GAAGAAAGCA GCATAGAAGA | 150 |
AAGCGAGTAC ATAACCAAGA ACCATGTTTG ATGAGAGGAG TCTACTACAA | 200 |
AAACATGAAA TGGCAAGCCG CCATTAAAGT CGAGAAGAAA CAAATCCACT | 250 |
TAGGCACTTT CTCTTCTCAA GAAGAGGCTG CTCGCTTATA CGATAGGGCT | 300 |
GCTTTCATGT GTGGGAGGGA ACCGAACTTT GAGCTCTCGG AAGAAGTTAT | 350 |
ACGAGAACTC AAACAGCAAA GCTGGGAAGA GTTCTTGAAT TGCACACGCC | 400 |
GAACAATTAC GAACAAAAAA CCAAAGAGTA GGATAGAACA TGAGGATACG | 450 |
AAGATCAATG CCAGCATGCC ACATCAACCA GAAGAAGAAG AGCAAGATTC | 500 |
AGACAAAATG TGA | 550 |
>AT4G13040.2 longest ORF length:170
MPEQLIIPGQ QKRLQRLSWR KRLLKKEAEE LGQNICISDQ PPKRRKQHRR | 50 |
KRVHNQEPCL MRGVYYKNMK WQAAIKVEKK QIHLGTFSSQ EEAARLYDRA | 100 |
AFMCGREPNF ELSEEVIREL KQQSWEEFLN CTRRTITNKK PKSRIEHEDT | 150 |
KINASMPHQP EEEEQDSDKM | 200 |
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