Locus |
Common name |
Short description |
AT4G13040 |
|
Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT4G13040.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
304 |
NdeI
| CA|TATG |
277 |
SacI
| GAGCT|C |
559 |
SmaI
| CCC|GGG |
196 |
Click here to view TAIR data
>AT4G13040.3 length:741
ATGAGAATCC ATGAAAAAGG TGGCGGTGGT AGGAGAAAAG TAAAACATTC | 50 |
AGAAGTCGAT ATGGTGAGCT TACGAAGACG TAGGCTATTG GGTCTTTGTT | 100 |
GTGGACCAAA TGGTTATGTG ACACCACTTC CATTTTTAAC TGCTGAGGAG | 150 |
ATGATCACTG GGATTCCAAA TCCTAATGCC AGAGCAGCTT ATAATCCCGG | 200 |
GCCAGCAGAA ACGGTTACAA CGGTTATCGT GGAGAAAAAG GCTATTGAAG | 250 |
AAAGAAGCCG AAGAACTCGG TCAAAACATA TGCATTTCAG GTCTGATTAT | 300 |
TCAGATATCT CACCGGTTAA TTCTGATTCC ATCTCACCAA AATACCAGCC | 350 |
GCCGAAACGA AGAAAGCAGC ATAGAAGAAA GCGAGTACAT AACCAAGAAC | 400 |
CATGTTTGAT GAGAGGAGTC TACTACAAAA ACATGAAATG GCAAGCCGCC | 450 |
ATTAAAGTCG AGAAGAAACA AATCCACTTA GGCACTTTCT CTTCTCAAGA | 500 |
AGAGGCTGCT CGCTTATACG ATAGGGCTGC TTTCATGTGT GGGAGGGAAC | 550 |
CGAACTTTGA GCTCTCGGAA GAAGTTATAC GAGAACTCAA ACAGCAAAGC | 600 |
TGGGAAGAGT TCTTGAATTG CACACGCCGA ACAATTACGA ACAAAAAACC | 650 |
AAAGAGTAGG ATAGAACATG AGGATACGAA GATCAATGCC AGCATGCCAC | 700 |
ATCAACCAGA AGAAGAAGAG CAAGATTCAG ACAAAATGTG A | 750 |
>AT4G13040.3 longest ORF length:246
MRIHEKGGGG RRKVKHSEVD MVSLRRRRLL GLCCGPNGYV TPLPFLTAEE | 50 |
MITGIPNPNA RAAYNPGPAE TVTTVIVEKK AIEERSRRTR SKHMHFRSDY | 100 |
SDISPVNSDS ISPKYQPPKR RKQHRRKRVH NQEPCLMRGV YYKNMKWQAA | 150 |
IKVEKKQIHL GTFSSQEEAA RLYDRAAFMC GREPNFELSE EVIRELKQQS | 200 |
WEEFLNCTRR TITNKKPKSR IEHEDTKINA SMPHQPEEEE QDSDKM | 250 |
|