fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G13480 ATMYB79 myb domain protein 79 (.1)

>AT4G13480.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 28
NdeI CA|TATG 657
PstI CTGCA|G 138
StyI C|C[AT][AT]GG 28, 742


Click here to view TAIR data

>AT4G13480.1 length:786
ATGGTGGAAG AAGTTTGGAG AAAGGGTCCA TGGACCGCCG AAGAAGACCG 
50
TCTTTTGATC GAATACGTCC GTGTTCACGG TGAAGGTCGT TGGAACTCTG 
100
TCTCTAAACT CGCAGGATTG AAAAGGAATG GCAAAAGCTG CAGACTAAGA 
150
TGGGTGAATT ACCTTAGACC AGACCTCAAG AGAGGACAGA TCACTCCACA 
200
TGAAGAAAGT ATAATACTTG AGCTACACGC TAAGTGGGGA AATAGGTGGT 
250
CAACAATTGC ACGTAGTTTA CCAGGAAGAA CAGACAATGA GATCAAGAAC 
300
TATTGGAGAA CCCATTTCAA GAAAAAGGCA AAGCCTACGA CTAACAATGC 
350
GGAGAAGATA AAGAGTCGTC TCCTAAAAAG GCAACACTTC AAGGAACAGA 
400
GAGAAATAGA GTTGCAACAA GAACAGCAGT TGTTTCAGTT CGACCAACTC 
450
GGTATGAAAA AGATCATCTC TTTACTCGAA GAAAACAATA GCAGTAGCAG 
500
TAGCGATGGC GGTGGTGATG TGTTCTATTA TCCTGATCAA ATAACACATT 
550
CATCAAAACC CTTTGGCTAT AACTCTAATT CATTAGAGGA GCAGTTACAA 
600
GGTAGATTTT CTCCTGTAAA CATACCTGAT GCTAATACTA TGAACGAAGA 
650
CAATGCCATA TGGGACGGGT TTTGGAACAT GGATGTTGTA AATGGACATG 
700
GTGGGAACTT GGGTGTTGTG GCTGCTACTG CTGCTTGTGG CCCAAGGAAG 
750
CCCTATTTCC ATAACTTGGT GATTCCATTT TGTTAA
800

>AT4G13480.1 longest ORF length:261
MVEEVWRKGP WTAEEDRLLI EYVRVHGEGR WNSVSKLAGL KRNGKSCRLR 
50
WVNYLRPDLK RGQITPHEES IILELHAKWG NRWSTIARSL PGRTDNEIKN 
100
YWRTHFKKKA KPTTNNAEKI KSRLLKRQHF KEQREIELQQ EQQLFQFDQL 
150
GMKKIISLLE ENNSSSSSDG GGDVFYYPDQ ITHSSKPFGY NSNSLEEQLQ 
200
GRFSPVNIPD ANTMNEDNAI WDGFWNMDVV NGHGGNLGVV AATAACGPRK 
250
PYFHNLVIPF C
300