|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT4G13620 | Integrase-type DNA-binding superfamily protein (.1) |
>AT4G13620.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XhoI
| Name | Recognition sequence | Cut positions |
| BglII | A|GATCT | 938 |
| EcoRI | G|AATTC | 841 |
| SacI | GAGCT|C | 328 |
| StyI | C|C[AT][AT]GG | 370, 748 |
| XbaI | T|CTAGA | 381 |
Click here to view TAIR data
>AT4G13620.1 length:1167
ATGATCACAC CAATACACAC ACAACACTCC TTAATTCTCG TATATATAAA | 50 |
CATTTATTCT CCACCTATTT TGTCAAAATT AAGAACAGGC TTCATTCTCT | 100 |
GGACAAACAC TCAAAAAACA AACAAAAAAA GGAACATGGA AGATCAGTTT | 150 |
CCTAAAATAG AAACTAGCTT CATGCACGAC AAGCTCTTGT CTTCTGGAAT | 200 |
CTACGGGTTC TTGAGTTCTT CGACGCCGCC ACAACTTCTC GGTGTTCCAA | 250 |
TATTTTTGGA AGGTATGAAA TCTCCTCTTC TTCCTGCTTC TTCGACTCCG | 300 |
AGCTACTTTG TGTCGCCTCA TGATCATGAG CTCACATCTT CTATTCATCC | 350 |
ATCTCCGGTA GCTTCTGTTC CTTGGAACTT TCTAGAATCT TTTCCTCAGT | 400 |
CTCAACATCC TGATCATCAT CCTTCTAAAC CTCCAAACCT TACTTTGTTC | 450 |
CTTAAAGAAC CAAAGCTACT AGAACTTTCT CAATCCGAAA GCAACATGAG | 500 |
CCCTTACCAT AAATACATCC CAAACTCCTT TTATCAATCA GACCAAAACA | 550 |
GAAACGAATG GGTAGAGATC AATAAAACTC TAACCAACTA TCCCTCGAAA | 600 |
GGTTTTGGAA ACTATTGGCT AAGTACCACC AAGACTCAAC CCATGAAGTC | 650 |
AAAAACAAGA AAGGTTGTTC AGACGACGAC CCCAACAAAA CTGTATAGAG | 700 |
GAGTGAGACA AAGACACTGG GGCAAATGGG TCGCAGAGAT TAGGCTTCCA | 750 |
AGGAACAGAA CCCGTGTTTG GCTCGGCACT TTTGAAACCG CTGAGCAAGC | 800 |
AGCAATGGCT TACGATACAG CAGCTTATAT CCTTCGTGGC GAATTCGCAC | 850 |
ACCTCAACTT TCCTGATCTT AAACACCAGC TCAAGTCCGG TTCTTTGCGA | 900 |
TGCATGATCG CCTCACTTTT GGAGTCCAAG ATTCAACAGA TCTCATCTTC | 950 |
CCAAGTAAGT AACTCTCCTT CTCCTCCTCC TCCAAAAGTG GGAACACCGG | 1000 |
AGCAAAAGAA TCATCACATG AAGATGGAGT CAGGAGAAGA CGTGATGATG | 1050 |
AAGAAACAGA AAAGCCATAA GGAAGTGATG GAAGGAGATG GTGTACAATT | 1100 |
GAGTAGGATG CCTTCTTTGG ATATGGATCT CATTTGGGAT GCTCTCTCAT | 1150 |
TTCCTCATTC TTCTTGA | 1200 |
>AT4G13620.1 longest ORF length:388
MITPIHTQHS LILVYINIYS PPILSKLRTG FILWTNTQKT NKKRNMEDQF | 50 |
PKIETSFMHD KLLSSGIYGF LSSSTPPQLL GVPIFLEGMK SPLLPASSTP | 100 |
SYFVSPHDHE LTSSIHPSPV ASVPWNFLES FPQSQHPDHH PSKPPNLTLF | 150 |
LKEPKLLELS QSESNMSPYH KYIPNSFYQS DQNRNEWVEI NKTLTNYPSK | 200 |
GFGNYWLSTT KTQPMKSKTR KVVQTTTPTK LYRGVRQRHW GKWVAEIRLP | 250 |
RNRTRVWLGT FETAEQAAMA YDTAAYILRG EFAHLNFPDL KHQLKSGSLR | 300 |
CMIASLLESK IQQISSSQVS NSPSPPPPKV GTPEQKNHHM KMESGEDVMM | 350 |
KKQKSHKEVM EGDGVQLSRM PSLDMDLIWD ALSFPHSS | 400 |