fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G13640 UNE16 unfertilized embryo sac 16, Homeodomain-like superfamily protein (.1.2)

>AT4G13640.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 413, 539
NheI G|CTAGC 612
PvuII CAG|CTG 782
SacI GAGCT|C 133, 744
StyI C|C[AT][AT]GG 645
XbaI T|CTAGA 30, 531


Click here to view TAIR data

>AT4G13640.2 length:888
ATGTACTCGG CGATTCGGTC TTCGCTTCCT CTAGATGGCA GCTTGGGAGA 
50
CTACTCTGAC GGAACCAATC TTCCCATCGA CGCTTGTCTG GTCCTAACCA 
100
CTGACCCCAA GCCTCGCCTT CGTTGGACCT CTGAGCTCCA TGAAAGATTC 
150
GTTGACGCCG TCACTCAGCT CGGCGGACCC GACAAAGCAA CGCCTAAAAC 
200
TATAATGAGA ACAATGGGAG TGAAGGGTCT CACTCTTTAC CATCTCAAAT 
250
CTCATCTTCA GAAATTCCGC TTGGGGAGGC AATCTTGTAA AGAATCAATT 
300
GACAACTCTA AGGATGTTTC TTGTGTTGCG GAGAGTCAGG ACACTGGTTC 
350
ATCTTCAACA TCATCCTTAA GATTGGCTGC TCAAGAACAG AACGAGAGTT 
400
ACCAGGTCAC TGAAGCTTTG CGTGCCCAGA TGGAAGTCCA AAGAAGACTA 
450
CACGAGCAAC TAGAGTATAC GCAGGTGCAA AGGCGACTCC AGTTAAGGAT 
500
CGAGGCACAA GGGAAGTACC TGCAATCAAT TCTAGAGAAA GCTTGCAAGG 
550
CTATAGAGGA GCAAGCTGTT GCATTTGCTG GGTTAGAGGC AGCTAGAGAA 
600
GAGCTTTCAG AGCTAGCCAT AAAGGCCTCC ATCACCAATG GGTGCCAAGG 
650
AACAACAAGC ACCTTCGACA CAACCAAAAT GATGATTCCA TCCTTATCCG 
700
AGCTTGCAGT AGCAATAGAG CACAAGAACA ACTGTTCAGC AGAGAGCTCT 
750
CTGACTTCCA GCACTGTAGG AAGTCCGGTA TCAGCTGCGT TGATGAAGAA 
800
GAGACAACGA GGAGTGTTTG GAAATGGAGA TAGTGTGGTT GTTGGTCATG 
850
ATGCTGGATG GGTTATGCCT AGTAGTAGCA TTGGATGA
900

>AT4G13640.2 longest ORF length:295
MYSAIRSSLP LDGSLGDYSD GTNLPIDACL VLTTDPKPRL RWTSELHERF 
50
VDAVTQLGGP DKATPKTIMR TMGVKGLTLY HLKSHLQKFR LGRQSCKESI 
100
DNSKDVSCVA ESQDTGSSST SSLRLAAQEQ NESYQVTEAL RAQMEVQRRL 
150
HEQLEYTQVQ RRLQLRIEAQ GKYLQSILEK ACKAIEEQAV AFAGLEAARE 
200
ELSELAIKAS ITNGCQGTTS TFDTTKMMIP SLSELAVAIE HKNNCSAESS 
250
LTSSTVGSPV SAALMKKRQR GVFGNGDSVV VGHDAGWVMP SSSIG
300