fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G14465 AHL20 AT-hook motif nuclear-localized protein 20 (.1)

>AT4G14465.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 223
BglII A|GATCT 111, 299
NcoI C|CATGG 644
SmaI CCC|GGG 502
StyI C|C[AT][AT]GG 10, 444, 644


Click here to view TAIR data

>AT4G14465.1 length:846
ATGGCAAACC CTTGGTGGAC GAACCAGAGT GGTTTAGCGG GCATGGTGGA 
50
CCATTCGGTC TCCTCAGGCC ATCACCAAAA CCATCACCAC CAAAGTCTTC 
100
TTACCAAAGG AGATCTTGGA ATAGCCATGA ATCAGAGCCA AGACAACGAC 
150
CAAGACGAAG AAGATGATCC TAGAGAAGGA GCCGTTGAGG TGGTCAACCG 
200
TAGACCAAGA GGTAGACCAC CAGGATCCAA AAACAAACCC AAAGCTCCAA 
250
TCTTTGTGAC AAGAGACAGC CCCAACGCAC TCCGTAGCCA TGTCTTGGAG 
300
ATCTCCGACG GCAGTGACGT CGCCGACACA ATCGCTCACT TCTCAAGACG 
350
CAGGCAACGC GGCGTTTGCG TTCTCAGCGG GACAGGCTCA GTCGCTAACG 
400
TCACCCTCCG CCAAGCCGCC GCACCAGGAG GTGTGGTCTC TCTCCAAGGC 
450
AGGTTTGAAA TCTTATCTTT AACCGGTGCT TTCCTCCCTG GACCTTCCCC 
500
ACCCGGGTCA ACCGGTTTAA CGGTTTACTT AGCCGGGGTC CAGGGTCAGG 
550
TCGTTGGAGG TAGCGTTGTA GGCCCACTCT TAGCCATAGG GTCGGTCATG 
600
GTGATTGCTG CTACTTTCTC TAACGCTACT TATGAGAGAT TGCCCATGGA 
650
AGAAGAGGAA GACGGTGGCG GCTCAAGACA GATTCACGGA GGCGGTGACT 
700
CACCGCCCAG AATCGGTAGT AACCTGCCTG ATCTATCAGG GATGGCCGGG 
750
CCAGGCTACA ATATGCCGCC GCATCTGATT CCAAATGGGG CTGGTCAGCT 
800
AGGGCACGAA CCATATACAT GGGTCCACGC AAGACCACCT TACTGA
850

>AT4G14465.1 longest ORF length:281
MANPWWTNQS GLAGMVDHSV SSGHHQNHHH QSLLTKGDLG IAMNQSQDND 
50
QDEEDDPREG AVEVVNRRPR GRPPGSKNKP KAPIFVTRDS PNALRSHVLE 
100
ISDGSDVADT IAHFSRRRQR GVCVLSGTGS VANVTLRQAA APGGVVSLQG 
150
RFEILSLTGA FLPGPSPPGS TGLTVYLAGV QGQVVGGSVV GPLLAIGSVM 
200
VIAATFSNAT YERLPMEEEE DGGGSRQIHG GGDSPPRIGS NLPDLSGMAG 
250
PGYNMPPHLI PNGAGQLGHE PYTWVHARPP Y
300