Locus |
Common name |
Short description |
AT4G14465 |
AHL20 |
AT-hook motif nuclear-localized protein 20 (.1) |
>AT4G14465.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
223 |
BglII
| A|GATCT |
111, 299 |
NcoI
| C|CATGG |
644 |
SmaI
| CCC|GGG |
502 |
StyI
| C|C[AT][AT]GG |
10, 444, 644 |
Click here to view TAIR data
>AT4G14465.1 length:846
ATGGCAAACC CTTGGTGGAC GAACCAGAGT GGTTTAGCGG GCATGGTGGA | 50 |
CCATTCGGTC TCCTCAGGCC ATCACCAAAA CCATCACCAC CAAAGTCTTC | 100 |
TTACCAAAGG AGATCTTGGA ATAGCCATGA ATCAGAGCCA AGACAACGAC | 150 |
CAAGACGAAG AAGATGATCC TAGAGAAGGA GCCGTTGAGG TGGTCAACCG | 200 |
TAGACCAAGA GGTAGACCAC CAGGATCCAA AAACAAACCC AAAGCTCCAA | 250 |
TCTTTGTGAC AAGAGACAGC CCCAACGCAC TCCGTAGCCA TGTCTTGGAG | 300 |
ATCTCCGACG GCAGTGACGT CGCCGACACA ATCGCTCACT TCTCAAGACG | 350 |
CAGGCAACGC GGCGTTTGCG TTCTCAGCGG GACAGGCTCA GTCGCTAACG | 400 |
TCACCCTCCG CCAAGCCGCC GCACCAGGAG GTGTGGTCTC TCTCCAAGGC | 450 |
AGGTTTGAAA TCTTATCTTT AACCGGTGCT TTCCTCCCTG GACCTTCCCC | 500 |
ACCCGGGTCA ACCGGTTTAA CGGTTTACTT AGCCGGGGTC CAGGGTCAGG | 550 |
TCGTTGGAGG TAGCGTTGTA GGCCCACTCT TAGCCATAGG GTCGGTCATG | 600 |
GTGATTGCTG CTACTTTCTC TAACGCTACT TATGAGAGAT TGCCCATGGA | 650 |
AGAAGAGGAA GACGGTGGCG GCTCAAGACA GATTCACGGA GGCGGTGACT | 700 |
CACCGCCCAG AATCGGTAGT AACCTGCCTG ATCTATCAGG GATGGCCGGG | 750 |
CCAGGCTACA ATATGCCGCC GCATCTGATT CCAAATGGGG CTGGTCAGCT | 800 |
AGGGCACGAA CCATATACAT GGGTCCACGC AAGACCACCT TACTGA | 850 |
>AT4G14465.1 longest ORF length:281
MANPWWTNQS GLAGMVDHSV SSGHHQNHHH QSLLTKGDLG IAMNQSQDND | 50 |
QDEEDDPREG AVEVVNRRPR GRPPGSKNKP KAPIFVTRDS PNALRSHVLE | 100 |
ISDGSDVADT IAHFSRRRQR GVCVLSGTGS VANVTLRQAA APGGVVSLQG | 150 |
RFEILSLTGA FLPGPSPPGS TGLTVYLAGV QGQVVGGSVV GPLLAIGSVM | 200 |
VIAATFSNAT YERLPMEEEE DGGGSRQIHG GGDSPPRIGS NLPDLSGMAG | 250 |
PGYNMPPHLI PNGAGQLGHE PYTWVHARPP Y | 300 |
|