fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G14490 SMAD/FHA domain-containing protein (.1)

>AT4G14490.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 189, 987
EcoRI G|AATTC 219
EcoRV GAT|ATC 412
HindIII A|AGCTT 337, 555, 716
PacI TTAAT|TAA 600
XbaI T|CTAGA 57


Click here to view TAIR data

>AT4G14490.1 length:1161
ATGGTTACGC CATCGTTGAG ATTAGTATTC GTCAAGGGTC CAAGAGAAGG 
50
CGATGCTCTA GATTACAAGC CTGGATCTAC GATTCGTGTT GGTCGAATCG 
100
TTCGTGGTAA TGAAATCGCA ATTAAAGACG CTGGAATCTC CACTAAGCAT 
150
CTTCGGATCG AATCGGATTC TGGGAATTGG GTAATACAAG ATCTTGGATC 
200
TTCCAACGGT ACTTTATTGA ATTCGAATGC TCTTGATCCA GAGACGTCGG 
250
TAAATCTCGG AGATGGCGAT GTTATCAAAC TAGGTGAGTA TACATCTATT 
300
TTGGTGAATT TTGTGATTGA TGATTTTCAG GAGAAGAAGC TTACGAGGAA 
350
CAATAGGCGT CAGGCTAATG CGAGGAAGCG AATTAGGGTT TTAGAAAGTA 
400
TCAATTTGGG GGATATCACT GAGGAAGAAA AGGGTTTGGA TGTGAAATTT 
450
GAGAACAAGC CGAGTTCTAG GGTTAGGAAA GTTAGGAAAA TCGAGGATTC 
500
GGAGAAATTA GGGATTACTG ATGGATTACA AGAGGATCTG GTGGAGAAAA 
550
ATGGAAGCTT TAGGAATGTT GAAAGTATTC AGAGTTCATC TGTAAACTTA 
600
ATTAAGGTTG AAATGGAGGA TTGTGCAATG GTGGAGGAAA ATTTAGGGAG 
650
GGGATTGAAG AAGAGAGTGA GCAGTAAGGC TACGAGGAGC AAGAAGATTG 
700
AAGAAAGTGT AGGAAAAGCT TGTTTGGGAG TGGTTAATGT AGAGAAGGTA 
750
GAGACTTTAA AGGAGAAGAG GATTACTAGG GCTACAAGAA GCAAGAAGAT 
800
TGATATTGTT GGAGATTCTT ATTTGGAATT GGACATGGTT CTAAATCGAG 
850
CCAGAAAGAA CAAAGGGAAG AACAAGAAAG CGGATCAGAA GCCGTTGAAG 
900
AGCTTTGAAA ATGATGAGGT TACTGATTCA GGAGAGCAGG GTTTAAGCTG 
950
TCATGTTGAA GAAGATATGA ACAATGAACT TGATACAGAT CTAAGAAAGA 
1000
TGACATTAGG AGCATTGTTC AGTTTTCTGG AGGGTCATCT GTCAAAAGAG 
1050
ATAATTCACA AGACAGAAAA TATGATTGAG CCCATGCGAA GTAAAACTCA 
1100
GAGAGTTCGT GAGTATATTT CAGATCAAAG AAAAGTTCAG GCTAAAGCGT 
1150
GTATGTGTTG A
1200

>AT4G14490.1 longest ORF length:386
MVTPSLRLVF VKGPREGDAL DYKPGSTIRV GRIVRGNEIA IKDAGISTKH 
50
LRIESDSGNW VIQDLGSSNG TLLNSNALDP ETSVNLGDGD VIKLGEYTSI 
100
LVNFVIDDFQ EKKLTRNNRR QANARKRIRV LESINLGDIT EEEKGLDVKF 
150
ENKPSSRVRK VRKIEDSEKL GITDGLQEDL VEKNGSFRNV ESIQSSSVNL 
200
IKVEMEDCAM VEENLGRGLK KRVSSKATRS KKIEESVGKA CLGVVNVEKV 
250
ETLKEKRITR ATRSKKIDIV GDSYLELDMV LNRARKNKGK NKKADQKPLK 
300
SFENDEVTDS GEQGLSCHVE EDMNNELDTD LRKMTLGALF SFLEGHLSKE 
350
IIHKTENMIE PMRSKTQRVR EYISDQRKVQ AKACMC
400