fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G14540 NF-YB3 "nuclear factor Y, subunit B3", nuclear factor Y, subunit B3 (.1)

>AT4G14540.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 175
SacI GAGCT|C 419


Click here to view TAIR data

>AT4G14540.1 length:486
ATGGCGGATT CGGACAACGA TTCAGGAGGA CACAAAGACG GTGGAAATGC 
50
TTCGACACGT GAGCAAGATA GGTTTCTACC GATCGCTAAC GTTAGCAGGA 
100
TCATGAAGAA AGCACTTCCT GCGAACGCAA AAATCTCTAA GGATGCTAAA 
150
GAAACGGTTC AAGAGTGTGT ATCGGAATTC ATAAGTTTCA TCACCGGTGA 
200
GGCTTCTGAC AAGTGTCAGA GAGAGAAGAG GAAGACAATC AACGGTGACG 
250
ATCTTCTTTG GGCGATGACT ACGCTAGGGT TTGAGGACTA CGTGGAGCCT 
300
CTCAAGGTTT ATCTGCAAAA GTATAGGGAG GTGGAAGGAG AGAAGACTAC 
350
TACGGCAGGG AGACAAGGCG ATAAGGAAGG TGGAGGAGGA GGCGGTGGAG 
400
CTGGAAGTGG AAGTGGAGGA GCTCCGATGT ACGGTGGTGG CATGGTGACT 
450
ACGATGGGAC ATCAATTTTC CCATCATTTT TCTTAA
500

>AT4G14540.1 longest ORF length:161
MADSDNDSGG HKDGGNASTR EQDRFLPIAN VSRIMKKALP ANAKISKDAK 
50
ETVQECVSEF ISFITGEASD KCQREKRKTI NGDDLLWAMT TLGFEDYVEP 
100
LKVYLQKYRE VEGEKTTTAG RQGDKEGGGG GGGAGSGSGG APMYGGGMVT 
150
TMGHQFSHHF S
200