fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G14550 SLR, IAA14 SOLITARY ROOT, indole-3-acetic acid inducible 14 (.1)

>AT4G14550.1 CDS map

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Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 628
NcoI C|CATGG 347, 446
SacI GAGCT|C 170, 356
StyI C|C[AT][AT]GG 176, 347, 419, 446


Click here to view TAIR data

>AT4G14550.1 length:687
ATGAACCTTA AGGAGACGGA GCTTTGTCTT GGCCTCCCCG GAGGCACTGA 
50
AACCGTTGAA AGTCCGGCCA AGTCGGGTGT TGGGAACAAG AGAGGCTTCT 
100
CCGAGACCGT TGATCTCAAA CTTAATCTTC AATCTAACAA ACAAGGACAT 
150
GTGGATCTCA ACACTAATGG AGCTCCCAAG GAGAAGACCT TCCTTAAAGA 
200
CCCTTCTAAG CCTCCTGCTA AAGCACAAGT GGTGGGTTGG CCACCGGTGA 
250
GGAACTACCG GAAAAATGTT ATGGCTAATC AGAAGAGCGG CGAAGCAGAG 
300
GAGGCAATGA GTAGTGGTGG AGGAACCGTC GCCTTTGTGA AGGTTTCCAT 
350
GGATGGAGCT CCTTATCTTC GGAAGGTTGA CCTCAAGATG TACACCAGCT 
400
ACAAGGATCT CTCTGATGCC TTGGCCAAAA TGTTCAGCTC CTTTACCATG 
450
GGGAGTTATG GAGCACAAGG GATGATAGAT TTCATGAACG AGAGTAAAGT 
500
GATGGATCTG TTGAACAGTT CTGAGTATGT TCCAAGCTAC GAGGACAAAG 
550
ATGGTGACTG GATGCTCGTT GGTGATGTCC CCTGGCCGAT GTTTGTCGAG 
600
TCATGCAAAC GTTTGCGCAT AATGAAAGGA TCCGAAGCAA TTGGACTTGC 
650
TCCAAGAGCA ATGGAGAAGT TCAAGAACAG ATCATGA
700

>AT4G14550.1 longest ORF length:228
MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH 
50
VDLNTNGAPK EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE 
100
EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM 
150
GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE 
200
SCKRLRIMKG SEAIGLAPRA MEKFKNRS
250