Locus |
Common name |
Short description |
AT4G14550 |
SLR, IAA14 |
SOLITARY ROOT, indole-3-acetic acid inducible 14 (.1) |
>AT4G14550.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
628 |
NcoI
| C|CATGG |
347, 446 |
SacI
| GAGCT|C |
170, 356 |
StyI
| C|C[AT][AT]GG |
176, 347, 419, 446 |
Click here to view TAIR data
>AT4G14550.1 length:687
ATGAACCTTA AGGAGACGGA GCTTTGTCTT GGCCTCCCCG GAGGCACTGA | 50 |
AACCGTTGAA AGTCCGGCCA AGTCGGGTGT TGGGAACAAG AGAGGCTTCT | 100 |
CCGAGACCGT TGATCTCAAA CTTAATCTTC AATCTAACAA ACAAGGACAT | 150 |
GTGGATCTCA ACACTAATGG AGCTCCCAAG GAGAAGACCT TCCTTAAAGA | 200 |
CCCTTCTAAG CCTCCTGCTA AAGCACAAGT GGTGGGTTGG CCACCGGTGA | 250 |
GGAACTACCG GAAAAATGTT ATGGCTAATC AGAAGAGCGG CGAAGCAGAG | 300 |
GAGGCAATGA GTAGTGGTGG AGGAACCGTC GCCTTTGTGA AGGTTTCCAT | 350 |
GGATGGAGCT CCTTATCTTC GGAAGGTTGA CCTCAAGATG TACACCAGCT | 400 |
ACAAGGATCT CTCTGATGCC TTGGCCAAAA TGTTCAGCTC CTTTACCATG | 450 |
GGGAGTTATG GAGCACAAGG GATGATAGAT TTCATGAACG AGAGTAAAGT | 500 |
GATGGATCTG TTGAACAGTT CTGAGTATGT TCCAAGCTAC GAGGACAAAG | 550 |
ATGGTGACTG GATGCTCGTT GGTGATGTCC CCTGGCCGAT GTTTGTCGAG | 600 |
TCATGCAAAC GTTTGCGCAT AATGAAAGGA TCCGAAGCAA TTGGACTTGC | 650 |
TCCAAGAGCA ATGGAGAAGT TCAAGAACAG ATCATGA | 700 |
>AT4G14550.1 longest ORF length:228
MNLKETELCL GLPGGTETVE SPAKSGVGNK RGFSETVDLK LNLQSNKQGH | 50 |
VDLNTNGAPK EKTFLKDPSK PPAKAQVVGW PPVRNYRKNV MANQKSGEAE | 100 |
EAMSSGGGTV AFVKVSMDGA PYLRKVDLKM YTSYKDLSDA LAKMFSSFTM | 150 |
GSYGAQGMID FMNESKVMDL LNSSEYVPSY EDKDGDWMLV GDVPWPMFVE | 200 |
SCKRLRIMKG SEAIGLAPRA MEKFKNRS | 250 |
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