Locus |
Common name |
Short description |
AT4G14560 |
AXR5, IAA1 |
AUXIN RESISTANT 5, indole-3-acetic acid inducible (.1) |
>AT4G14560.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
481 |
BglII
| A|GATCT |
187, 270 |
NcoI
| C|CATGG |
433 |
SacI
| GAGCT|C |
248 |
StyI
| C|C[AT][AT]GG |
433 |
Click here to view TAIR data
>AT4G14560.1 length:507
ATGGAAGTCA CCAATGGGCT TAACCTTAAG GACACAGAGC TTCGTTTGGG | 50 |
ATTACCCGGA GCACAAGAAG AACAACAACT AGAACTTTCT TGCGTCAGAA | 100 |
GCAACAACAA GCGCAAGAAC AACGACTCAA CAGAAGAATC TGCTCCTCCT | 150 |
CCTGCAAAAA CACAAATCGT TGGATGGCCT CCAGTGAGAT CTAACCGTAA | 200 |
GAACAACAAC AACAAAAACG TGAGTTATGT GAAAGTGAGT ATGGACGGAG | 250 |
CTCCATATCT CCGTAAGATA GATCTCAAGA TGTACAAAAA CTATCCAGAG | 300 |
CTTCTCAAAG CACTAGAGAA CATGTTCAAG TTCACAGTAG GTGAATATTC | 350 |
CGAGAGAGAA GGCTACAAAG GATCTGGATT TGTACCTACT TATGAAGACA | 400 |
AAGATGGAGA TTGGATGTTG GTCGGTGATG TTCCATGGGA CATGTTCTCT | 450 |
TCATCTTGTC AAAAACTCAG AATCATGAAA GGATCCGAAG CTCCTACTGC | 500 |
CTTATGA | 550 |
>AT4G14560.1 longest ORF length:168
MEVTNGLNLK DTELRLGLPG AQEEQQLELS CVRSNNKRKN NDSTEESAPP | 50 |
PAKTQIVGWP PVRSNRKNNN NKNVSYVKVS MDGAPYLRKI DLKMYKNYPE | 100 |
LLKALENMFK FTVGEYSERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS | 150 |
SSCQKLRIMK GSEAPTAL | 200 |
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