fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G14560 AXR5, IAA1 AUXIN RESISTANT 5, indole-3-acetic acid inducible (.1)

>AT4G14560.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 481
BglII A|GATCT 187, 270
NcoI C|CATGG 433
SacI GAGCT|C 248
StyI C|C[AT][AT]GG 433


Click here to view TAIR data

>AT4G14560.1 length:507
ATGGAAGTCA CCAATGGGCT TAACCTTAAG GACACAGAGC TTCGTTTGGG 
50
ATTACCCGGA GCACAAGAAG AACAACAACT AGAACTTTCT TGCGTCAGAA 
100
GCAACAACAA GCGCAAGAAC AACGACTCAA CAGAAGAATC TGCTCCTCCT 
150
CCTGCAAAAA CACAAATCGT TGGATGGCCT CCAGTGAGAT CTAACCGTAA 
200
GAACAACAAC AACAAAAACG TGAGTTATGT GAAAGTGAGT ATGGACGGAG 
250
CTCCATATCT CCGTAAGATA GATCTCAAGA TGTACAAAAA CTATCCAGAG 
300
CTTCTCAAAG CACTAGAGAA CATGTTCAAG TTCACAGTAG GTGAATATTC 
350
CGAGAGAGAA GGCTACAAAG GATCTGGATT TGTACCTACT TATGAAGACA 
400
AAGATGGAGA TTGGATGTTG GTCGGTGATG TTCCATGGGA CATGTTCTCT 
450
TCATCTTGTC AAAAACTCAG AATCATGAAA GGATCCGAAG CTCCTACTGC 
500
CTTATGA
550

>AT4G14560.1 longest ORF length:168
MEVTNGLNLK DTELRLGLPG AQEEQQLELS CVRSNNKRKN NDSTEESAPP 
50
PAKTQIVGWP PVRSNRKNNN NKNVSYVKVS MDGAPYLRKI DLKMYKNYPE 
100
LLKALENMFK FTVGEYSERE GYKGSGFVPT YEDKDGDWML VGDVPWDMFS 
150
SSCQKLRIMK GSEAPTAL
200