fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G15090 FAR1 FAR-RED IMPAIRED RESPONSE 1, FRS (FAR1 Related Sequences) transcription factor family (.1)

>AT4G15090.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NotI, PacI, PvuII, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 1180
EcoRI G|AATTC 2319
NdeI CA|TATG 43
NheI G|CTAGC 2137
PstI CTGCA|G 1429, 1759
SacI GAGCT|C 998, 1054
SalI G|TCGAC 1329
SpeI A|CTAGT 1965
StyI C|C[AT][AT]GG 2301


Click here to view TAIR data

>AT4G15090.1 length:2484
ATGGATTTGC AAGAGAATCT GGTTAGTGAT GCAGGGGATG ACCATATGGT 
50
TGACATTGTA GTTGAACCGC ATAGTAACAG AGATATAGGA ATTGTTGATG 
100
AGTTCAATAT AGGTGGAGAT GTTGGATTTA GTGGTGATCT GGATCTTGAG 
150
CCACGAAATG GTATAGACTT TGATACCCAT GAGGCAGCGT ATATCTTTTA 
200
TCAGGAATAT GCAAAATCTA TGGGTTTTAC TACGTCGATT AAAAACAGTA 
250
GACGTTCCAA GAAAACTAAA GACTTCATTG ATGCTAAGTT TGCTTGTTCC 
300
AGATATGGTG TGACTCCTGA GTCTGAGAGT AGTGGTAGTA GTAGTCGAAG 
350
GTCAACTGTG AAAAAAACAG ATTGCAAGGC TAGTATGCAT GTGAAGAGAA 
400
GACCAGATGG GAAATGGATC ATTCATGAGT TTGTAAAGGA TCACAATCAC 
450
GAACTTTTAC CTGCCCTTGC TTATCATTTC CGGATTCAGA GGAATGTCAA 
500
GTTAGCTGAG AAGAATAATA TCGACATTCT GCATGCGGTT AGTGAACGGA 
550
CCAAAAAAAT GTATGTTGAA ATGTCGAGAC AATCTGGCGG ATATAAGAAT 
600
ATCGGGTCTC TTCTTCAGAC CGATGTCAGC AGTCAGGTTG ATAAGGGTAG 
650
GTATCTAGCT TTGGAAGAAG GAGATTCTCA AGTACTGCTT GAGTACTTCA 
700
AGCGTATCAA GAAAGAAAAC CCTAAATTCT TTTATGCTAT AGACCTGAAC 
750
GAGGACCAAC GTTTAAGAAA TCTGTTTTGG GCTGATGCCA AGAGCAGAGA 
800
TGACTATTTG AGTTTCAATG ATGTTGTATC CTTTGATACT ACTTATGTCA 
850
AGTTTAACGA TAAGTTGCCA CTAGCTTTAT TTATTGGGGT GAACCATCAC 
900
TCCCAACCTA TGTTACTAGG CTGTGCATTG GTTGCTGATG AGTCTATGGA 
950
GACTTTTGTG TGGCTGATAA AAACATGGCT ACGAGCAATG GGTGGTCGAG 
1000
CTCCTAAAGT TATACTCACT GACCAAGATA AATTCTTGAT GTCTGCTGTT 
1050
TCAGAGCTCC TACCAAACAC TCGTCATTGC TTTGCGTTAT GGCATGTTTT 
1100
AGAAAAGATT CCTGAATATT TCTCACATGT GATGAAACGG CACGAGAATT 
1150
TCTTACTGAA ATTCAACAAA TGCATTTTCA GATCTTGGAC AGATGATGAG 
1200
TTTGATATGA GGTGGTGGAA AATGGTCAGC CAGTTTGGAC TTGAGAATGA 
1250
TGAATGGCTG CTATGGTTGC ATGAACATCG CCAAAAGTGG GTGCCCACAT 
1300
TTATGAGCGA TGTGTTTCTG GCAGGCATGT CGACATCTCA ACGTTCAGAA 
1350
AGTGTGAACT CTTTCTTCGA TAAGTACATC CATAAGAAAA TCACGCTGAA 
1400
AGAGTTCTTG AGGCAATACG GTGTGATTCT GCAGAATAGG TACGAAGAGG 
1450
AATCTGTTGC AGATTTCGAT ACTTGCCACA AGCAACCTGC ATTGAAGTCC 
1500
CCCTCGCCCT GGGAGAAGCA AATGGCAACA ACTTACACCC ACACAATATT 
1550
TAAGAAATTT CAAGTCGAGG TCTTGGGGGT TGTCGCTTGC CATCCTAGAA 
1600
AGGAAAAAGA AGATGAAAAT ATGGCGACGT TTAGAGTTCA AGACTGTGAA 
1650
AAAGACGATG ACTTTCTTGT AACGTGGAGC AAAACTAAGT CAGAACTTTG 
1700
CTGCTTCTGT CGTATGTTTG AATACAAAGG GTTTCTTTGT CGGCATGCTT 
1750
TGATGATTCT GCAGATGTGT GGTTTCGCCA GCATCCCGCC TCAGTATATA 
1800
TTGAAAAGGT GGACAAAAGA TGCTAAGAGT GGAGTATTAG CTGGTGAAGG 
1850
AGCAGACCAG ATACAGACCC GAGTTCAGCG CTATAACGAT TTGTGTAGTC 
1900
GAGCCACTGA ATTGAGTGAG GAAGGTTGTG TGTCAGAAGA AAACTACAAC 
1950
ATCGCATTGC GCACACTAGT CGAGACCCTG AAAAATTGTG TTGATATGAA 
2000
TAATGCTAGA AACAACATCA CTGAGTCTAA TAGCCAGCTT AATAATGGTA 
2050
CTCACGAAGA AGAAAACCAG GTAATGGCTG GGGTAAAAGC AACAAAAAAG 
2100
AAGACTGTAT ATAGGAAAAG AAAGGGACAA CAAGAGGCTA GCCAAATGCT 
2150
TGAATCTCAA CAGAGCTTGC AACCAATGGA AACTATAAGT TCAGAGGCGA 
2200
TGGACATGAA TGGTTACTAT GGTCCTCAAC AGAACGTTCA AGGACTGTTA 
2250
AATTTAATGG AGCCACCTCA TGAAGGCTAC TATGTAGATC AACGAACCAT 
2300
CCAAGGCCTG GGACAACTGA ATTCGATAGC ACCGGCGCAG GATAGCTTCT 
2350
TCACGAATCA GCAAGCCATG TCTGGGATGG TGGGTCAAAT CGATTTCAGA 
2400
CCTCCTCCCA ATTTCACTTA CACTTTACAG GAAGAGCATT TGAGTTCTGC 
2450
CCAATTACCT GGTAGTTCAT CAAGGCAGCT ATAG
2500

>AT4G15090.1 longest ORF length:827
MDLQENLVSD AGDDHMVDIV VEPHSNRDIG IVDEFNIGGD VGFSGDLDLE 
50
PRNGIDFDTH EAAYIFYQEY AKSMGFTTSI KNSRRSKKTK DFIDAKFACS 
100
RYGVTPESES SGSSSRRSTV KKTDCKASMH VKRRPDGKWI IHEFVKDHNH 
150
ELLPALAYHF RIQRNVKLAE KNNIDILHAV SERTKKMYVE MSRQSGGYKN 
200
IGSLLQTDVS SQVDKGRYLA LEEGDSQVLL EYFKRIKKEN PKFFYAIDLN 
250
EDQRLRNLFW ADAKSRDDYL SFNDVVSFDT TYVKFNDKLP LALFIGVNHH 
300
SQPMLLGCAL VADESMETFV WLIKTWLRAM GGRAPKVILT DQDKFLMSAV 
350
SELLPNTRHC FALWHVLEKI PEYFSHVMKR HENFLLKFNK CIFRSWTDDE 
400
FDMRWWKMVS QFGLENDEWL LWLHEHRQKW VPTFMSDVFL AGMSTSQRSE 
450
SVNSFFDKYI HKKITLKEFL RQYGVILQNR YEEESVADFD TCHKQPALKS 
500
PSPWEKQMAT TYTHTIFKKF QVEVLGVVAC HPRKEKEDEN MATFRVQDCE 
550
KDDDFLVTWS KTKSELCCFC RMFEYKGFLC RHALMILQMC GFASIPPQYI 
600
LKRWTKDAKS GVLAGEGADQ IQTRVQRYND LCSRATELSE EGCVSEENYN 
650
IALRTLVETL KNCVDMNNAR NNITESNSQL NNGTHEEENQ VMAGVKATKK 
700
KTVYRKRKGQ QEASQMLESQ QSLQPMETIS SEAMDMNGYY GPQQNVQGLL 
750
NLMEPPHEGY YVDQRTIQGL GQLNSIAPAQ DSFFTNQQAM SGMVGQIDFR 
800
PPPNFTYTLQ EEHLSSAQLP GSSSRQL
850