fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G15250 COL11 B-box type zinc finger protein with CCT domain (.1)

>AT4G15250.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 305
NcoI C|CATGG 784
StyI C|C[AT][AT]GG 204, 784


Click here to view TAIR data

>AT4G15250.1 length:993
ATGGAGGCTC GATGTGACTT TTGTGGAACC GAAAAAGCAT TAATCTACTG 
50
CAAATCTGAT TCGGCTAAAC TTTGTTTAAA CTGTGACGTT AATGTACACT 
100
CAGCGAATCC TCTGTCTCAA AGACACACGC GATCTCTACT CTGCGAGAAA 
150
TGTTCCTTAC AACCCACGGC AGTACACTGT ATGAACGAAA ATGTTTCTCT 
200
TTGCCAAGGA TGTCAGTGGA CCGCTAGTAA CTGCACTGGT TTAGGACACA 
250
GACTTCAGAG TCTGAACCCT TACTCTGATT GTCCTTCTCC ATCAGATTTC 
300
GGCAAGATCT GGTCTTCAAC TTTAGAACCT TCTGTCACAA GTTTGGTCTC 
350
TCCATTTTCT GATACCCTGC TCCAGGAATT AGACGATTGG AATGGTTCAT 
400
CAACTTCCGT GGTTACACAA ACTCAGAACC TTAAAGACTA TTCTTCTTTC 
450
TTTCCTATGG AATCTAATCT TCCAAAAGTG ATAGAAGAGG AATGTTCTGG 
500
TTTGGATCTA TGCGAAGGGA TAAACTTAGA TGATGCGCCG TTGAATTTCA 
550
ACGCAAGCAA TGATATAATC GGATGTTCAT CACTTGACAA TACCAAATGT 
600
TACGAGTACG AGGATTCTTT TAAGGAAGAG AATAACATTG GCCTTCCTTC 
650
ATTACTGCTT CCTACTTTAT CCGGGAACGT TGTACCGAAC ATGTCACTTT 
700
CGATGTCTAA CCTCACAGGA GAAAGCAATG CGACTGATTA CCAAGATTGC 
750
GGAATTTCAC CAGGGTTTCT CATAGGAGAT TCGCCATGGG AATCGAATGT 
800
TGAAGTTAGT TTTAATCCAA AATTAAGGGA TGAGGCTAAA AAGAGATACA 
850
AACAAAAGAA ATCAAAGCGC ATGTTTGGGA AGCAAATAAG ATATGCATCA 
900
CGCAAAGCCA GAGCTGATAC GAGAAAACGG GTCAAAGGGA GATTTGTAAA 
950
ATCTGGAGAA ACTTTTGAGT ATGATCCGTC ACTGGTGATG TGA
1000

>AT4G15250.1 longest ORF length:330
MEARCDFCGT EKALIYCKSD SAKLCLNCDV NVHSANPLSQ RHTRSLLCEK 
50
CSLQPTAVHC MNENVSLCQG CQWTASNCTG LGHRLQSLNP YSDCPSPSDF 
100
GKIWSSTLEP SVTSLVSPFS DTLLQELDDW NGSSTSVVTQ TQNLKDYSSF 
150
FPMESNLPKV IEEECSGLDL CEGINLDDAP LNFNASNDII GCSSLDNTKC 
200
YEYEDSFKEE NNIGLPSLLL PTLSGNVVPN MSLSMSNLTG ESNATDYQDC 
250
GISPGFLIGD SPWESNVEVS FNPKLRDEAK KRYKQKKSKR MFGKQIRYAS 
300
RKARADTRKR VKGRFVKSGE TFEYDPSLVM 
350