fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G16141 GATA type zinc finger transcription factor family protein (.1)

>AT4G16141.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 417
KpnI GGTAC|C 489


Click here to view TAIR data

>AT4G16141.1 length:594
ATGTCAATGA CGGAAGAAAC CAAGACGACG AAGCTCGAAT CGGCGGGAGA 
50
TTCGTCCGAT GTAGACAACG GGAACTGTAG TAGCAGTGGA AGTGGAGGTG 
100
ATACGAAGAA GACATGCGTT GATTGCGGAA CAAGCAGGAC TCCTCTTTGG 
150
CGTGGTGGAC CTGCTGGCCC TAAATCATTG TGCAATGCGT GTGGTATCAA 
200
GAGCAGAAAG AAGAGACAAG CAGCTCTTGG AATTAGACAA GATGATATTA 
250
AAATCAAGAG CAAAAGTAAT AACAATCTTG GTCTTGAGAG CCGAAATGTC 
300
AAGACCGGAA AAGGCGAACC AGTTAATGTT AAGATTGCCA AATGTGAACC 
350
GGGAATTGTC AAGATTGCCA AAGGTGAACC AGGAAATGTC AAGAACAAAA 
400
TCAAGAGAGA TCCTGAGAAT TCCAGTAGCA GCAATAATAA CAAGAAGAAC 
450
GTGAAAAGGG TTGGTAGATT TTTGGATTTT GGGTTTAAGG TACCGGCGAT 
500
GAAGAGATCG GCTGTGGAGA AGAAGAGGCT ATGGAGGAAA CTTGGGGAAG 
550
AGGAACGAGC CGCAGTACTT CTCATGGCTC TTTCTTGTGG TTGA
600

>AT4G16141.1 longest ORF length:197
MSMTEETKTT KLESAGDSSD VDNGNCSSSG SGGDTKKTCV DCGTSRTPLW 
50
RGGPAGPKSL CNACGIKSRK KRQAALGIRQ DDIKIKSKSN NNLGLESRNV 
100
KTGKGEPVNV KIAKCEPGIV KIAKGEPGNV KNKIKRDPEN SSSSNNNKKN 
150
VKRVGRFLDF GFKVPAMKRS AVEKKRLWRK LGEEERAAVL LMALSCG
200