fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G16150 calmodulin binding;transcription regulators (.1)

>AT4G16150.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HpaI, NcoI, NotI, PacI, SacI, SalI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 2414
BglII A|GATCT 63
EcoRI G|AATTC 1939
HindIII A|AGCTT 22
KpnI GGTAC|C 1617
NdeI CA|TATG 1233
NheI G|CTAGC 2245
PstI CTGCA|G 653, 2168
PvuII CAG|CTG 1961, 2716
SmaI CCC|GGG 795
SpeI A|CTAGT 1507
StyI C|C[AT][AT]GG 1764
XbaI T|CTAGA 66, 589


Click here to view TAIR data

>AT4G16150.1 length:2772
ATGGCCGGCG TTGATTCCGG CAAGCTTATC GGCTCTGAGA TTCATGGATT 
50
CCATACTTTA CAAGATCTAG ATATACAAAC AATGTTAGAT GAAGCATACA 
100
GTAGGTGGCT CCGTCCTAAT GAGATCCATG CTCTTCTCTG TAACCATAAA 
150
TTCTTCACCA TCAACGTCAA GCCTGTGAAC TTACCCAAAA GTGGTACGAT 
200
TGTGTTGTTT GATCGTAAGA TGTTGAGGAA CTTTAGAAAG GATGGTCATA 
250
ACTGGAAAAA GAAAAAGGAT GGAAAGACAA TTAAGGAAGC TCATGAACAT 
300
CTAAAAGTTG GTAATGAGGA AAGGATTCAT GTTTATTATG CCCACGGTGA 
350
GGATACCCCT ACATTTGTGC GAAGGTGTTA CTGGTTATTG GATAAGTCTC 
400
AGGAGCACAT AGTTCTTGTC CACTATCGCG AGACACATGA GGTTCATGCA 
450
GCTCCAGCAA CACCTGGGAA CTCGTACTCA AGTTCGATCA CTGACCACTT 
500
ATCTCCTAAA ATTGTAGCTG AAGATACCAG TTCTGGTGTC CATAATACTT 
550
GTAATACAGG TTTTGAAGTG CGGAGCAACA GTCTGGGTTC TAGAAATCAT 
600
GAGATTAGGC TTCATGAGAT CAACACACTT GATTGGGATG AGCTTCTAGT 
650
ACCTGCAGAT ATTAGCAACC AATCTCATCC AACCGAAGAA GATATGCTAT 
700
ACTTCACAGA ACAGCTCCAA ACTGCACCCA GGGGATCTGT AAAGCAAGGA 
750
AATCACCTTG CAGGCTACAA CGGATCAGTA GATATACCAT CATTCCCGGG 
800
TCTTGAAGAT CCTGTATATC AAAATAATAA CTCATGTGGT GCAGGAGAAT 
850
TTTCTAGTCA GCATTCGCAC TGTGGAGTAG ATCCAAATCT ACAGAGAAGG 
900
GATTTCAGTG CAACAGTTAC TGATCAACCA GGTGATGCTT TGCTTAATAA 
950
CGGTTATGGA AGTCAGGATA GTTTTGGAAG GTGGGTGAAC AACTTCATTA 
1000
GTGACTCTCC TGGTTCCGTC GATGATCCTT CCCTTGAAGC TGTATATACA 
1050
CCTGGGCAGG ATTCATCTAC TCCTCCTACT GTATTTCATT CCCACTCTGA 
1100
CATACCGGAG CAAGTATTCA ACATAACTGA TGTTTCACCT GCCTGGGCGT 
1150
ATTCGACAGA GAAAACAAAG ATTCTTGTAA CTGGGTTCTT TCACGACAGC 
1200
TTCCAACATT TGGGAAGATC AAACCTCATC TGCATATGTG GAGAGTTGCG 
1250
TGTCCCCGCC GAATTTCTCC AGATGGGGGT TTATCGTTGC TTCCTTCCTC 
1300
CTCAATCTCC TGGGGTGGTG AACCTTTATC TTAGTGTCGA TGGAAACAAA 
1350
CCGATCAGCC AATTGTTCAG CTTCGAACAC CGCTCAGTTC AGTTTATCGA 
1400
AAAAGCCATC CCTCAAGACG ACCAGCTATA CAAGTGGGAA GAATTTGAGT 
1450
TCCAAGTCAG ACTTGCTCAT CTTCTGTTCA CTTCTTCGAA CAAAATCAGC 
1500
GTTTTAACTA GTAAAATATC ACCTGAAAAC CTTCTTGAGG CTAAGAAACT 
1550
CGCCAGCAGG ACTTCGCATC TCTTAAATAG TTGGGCTTAT TTAATGAAGT 
1600
CAATTCAGGC AAATGAGGTA CCGTTTGATC AAGCGAGGGA CCATCTCTTT 
1650
GAGCTTACTC TGAAAAATAG GCTGAAAGAG TGGCTTTTGG AGAAGGTCAT 
1700
CGAAAACCGC AACACTAAGG AATATGACTC TAAAGGGCTT GGAGTGATCC 
1750
ACCTCTGTGC CGTCCTAGGA TACACTTGGT CAATCCTTCT CTTCTCCTGG 
1800
GCAAATATAT CGTTGGATTT CCGTGATAAG CAGGGTTGGA CTGCTCTTCA 
1850
TTGGGCAGCA TACTATGGAA GGGAGAAAAT GGTGGCTGCT CTTCTATCTG 
1900
CGGGGGCAAG GCCAAACCTG GTGACAGACC CTACTAAGGA ATTCCTCGGC 
1950
GGCTGCACGG CAGCTGATCT GGCACAACAG AAAGGTTATG ACGGTTTAGC 
2000
AGCTTTTCTT GCTGAGAAAT GTCTTGTAGC ACAGTTCAAG GACATGCAAA 
2050
CGGCTGGAAA CATTAGTGGC AACCTTGAAA CCATCAAGGC AGAGAAGTCG 
2100
TCAAATCCAG GGAATGCAAA TGAAGAGGAG CAAAGCCTGA AGGACACTCT 
2150
AGCGGCATAC AGAACTGCTG CAGAGGCAGC GGCGCGGATT CAGGGAGCGT 
2200
TCAGGGAGCA CGAGCTGAAA GTTAGGTCAA GCGCAGTTAG GTTTGCTAGC 
2250
AAGGAAGAAG AAGCCAAAAA CATAATAGCC GCGATGAAGA TTCAGCACGC 
2300
GTTTCGCAAT TTCGAGGTTC GTAGGAAGAT TGCAGCCGCT GCTCGGATTC 
2350
AGTATAGGTT CCAAACATGG AAAATGAGGC GGGAATTTCT GAACATGCGA 
2400
AAGAAGGCAA TTAGGATCCA GGCTGCGTTT AGAGGTTTCC AAGTAAGAAG 
2450
ACAGTACCAG AAAATAACAT GGTCAGTGGG AGTTCTTGAG AAGGCAATTC 
2500
TGAGATGGAG ACTGAAGAGA AAAGGATTCA GAGGCCTTCA GGTAAGTCAA 
2550
CCTGACGAGA AGGAAGGGAG TGAGGCGGTG GAGGATTTCT ACAAGACAAG 
2600
CCAGAAACAA GCGGAGGAAC GGCTTGAGAG GTCAGTGGTT AAAGTCCAGG 
2650
CCATGTTCCG GTCCAAGAAG GCTCAGCAAG ATTACAGAAG GATGAAACTG 
2700
GCTCATGAAG AAGCTCAGCT GGAGTATGAT GGGATGCAAG AACTTGATCA 
2750
AATGGCTACG GAGGAGAGCT GA
2800

>AT4G16150.1 longest ORF length:923
MAGVDSGKLI GSEIHGFHTL QDLDIQTMLD EAYSRWLRPN EIHALLCNHK 
50
FFTINVKPVN LPKSGTIVLF DRKMLRNFRK DGHNWKKKKD GKTIKEAHEH 
100
LKVGNEERIH VYYAHGEDTP TFVRRCYWLL DKSQEHIVLV HYRETHEVHA 
150
APATPGNSYS SSITDHLSPK IVAEDTSSGV HNTCNTGFEV RSNSLGSRNH 
200
EIRLHEINTL DWDELLVPAD ISNQSHPTEE DMLYFTEQLQ TAPRGSVKQG 
250
NHLAGYNGSV DIPSFPGLED PVYQNNNSCG AGEFSSQHSH CGVDPNLQRR 
300
DFSATVTDQP GDALLNNGYG SQDSFGRWVN NFISDSPGSV DDPSLEAVYT 
350
PGQDSSTPPT VFHSHSDIPE QVFNITDVSP AWAYSTEKTK ILVTGFFHDS 
400
FQHLGRSNLI CICGELRVPA EFLQMGVYRC FLPPQSPGVV NLYLSVDGNK 
450
PISQLFSFEH RSVQFIEKAI PQDDQLYKWE EFEFQVRLAH LLFTSSNKIS 
500
VLTSKISPEN LLEAKKLASR TSHLLNSWAY LMKSIQANEV PFDQARDHLF 
550
ELTLKNRLKE WLLEKVIENR NTKEYDSKGL GVIHLCAVLG YTWSILLFSW 
600
ANISLDFRDK QGWTALHWAA YYGREKMVAA LLSAGARPNL VTDPTKEFLG 
650
GCTAADLAQQ KGYDGLAAFL AEKCLVAQFK DMQTAGNISG NLETIKAEKS 
700
SNPGNANEEE QSLKDTLAAY RTAAEAAARI QGAFREHELK VRSSAVRFAS 
750
KEEEAKNIIA AMKIQHAFRN FEVRRKIAAA ARIQYRFQTW KMRREFLNMR 
800
KKAIRIQAAF RGFQVRRQYQ KITWSVGVLE KAILRWRLKR KGFRGLQVSQ 
850
PDEKEGSEAV EDFYKTSQKQ AEERLERSVV KVQAMFRSKK AQQDYRRMKL 
900
AHEEAQLEYD GMQELDQMAT EES
950