fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G16430 bHLH003, INU3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G16430.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NotI, PacI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 597
HindIII A|AGCTT 65, 118, 337
NheI G|CTAGC 207
PstI CTGCA|G 506
PvuII CAG|CTG 563, 730
SacI GAGCT|C 392
SalI G|TCGAC 725


Click here to view TAIR data

>AT4G16430.1 length:1404
ATGGGTCAAA AGTTTTGGGA GAATCAAGAA GATCGAGCGA TGGTTGAATC 
50
CACCATAGGC TCTGAAGCTT GCGACTTTTT CATCTCAACA GCTTCAGCTT 
100
CCAACACTGC CTTGTCCAAG CTTGTCTCAC CACCAAGTGA TTCCAATCTC 
150
CAACAAGGGT TACGTCACGT TGTTGAAGGA TCTGATTGGG ATTATGCTCT 
200
TTTCTGGCTA GCGTCCAACG TTAATAGCTC TGATGGTTGT GTCTTGATCT 
250
GGGGAGATGG TCATTGCCGT GTCAAAAAGG GTGCTTCAGG TGAGGATTAC 
300
TCTCAGCAAG ATGAGATCAA AAGACGTGTG CTTCGCAAGC TTCACTTGTC 
350
GTTCGTTGGT TCAGATGAAG ATCATCGTTT GGTGAAATCA GGAGCTCTTA 
400
CTGATCTCGA CATGTTTTAT CTGGCTTCTT TGTACTTTTC CTTTAGGTGT 
450
GATACCAATA AGTACGGTCC TGCTGGAACC TATGTGTCTG GGAAGCCTCT 
500
TTGGGCTGCA GATTTGCCTA GCTGCTTGAG TTATTATAGG GTTAGGTCTT 
550
TCTTAGCTAG GTCAGCTGGT TTTCAGACTG TGTTGTCTGT ACCAGTGAAT 
600
TCTGGAGTTG TGGAGCTTGG TTCTTTAAGA CATATTCCAG AAGATAAGAG 
650
TGTGATTGAG ATGGTGAAAT CAGTGTTTGG TGGGTCTGAC TTTGTTCAGG 
700
CTAAAGAAGC TCCTAAAATC TTTGGTCGAC AGCTGAGTCT TGGTGGAGCA 
750
AAACCTCGGT CTATGAGTAT TAATTTCTCC CCGAAGACCG AGGATGACAC 
800
GGGTTTCTCA TTGGAATCGT ATGAGGTGCA AGCGATCGGA GGCTCTAATC 
850
AAGTGTATGG TTATGAGCAA GGGAAAGATG AGACATTGTA TCTAACTGAC 
900
GAGCAAAAGC CGAGGAAGAG AGGGAGAAAA CCAGCAAATG GAAGAGAAGA 
950
GGCTCTAAAC CATGTGGAAG CGGAACGGCA GAGGAGGGAG AAGCTGAACC 
1000
AGAGATTCTA CGCTTTGAGA GCGGTGGTGC CTAACATCTC CAAGATGGAC 
1050
AAGGCTTCGC TCCTTGCAGA CGCAATCACT TACATCACGG ATATGCAGAA 
1100
GAAAATCAGG GTGTATGAAA CAGAGAAGCA GATAATGAAG AGGAGGGAGA 
1150
GTAATCAGAT AACTCCAGCA GAGGTTGATT ATCAACAGAG GCATGATGAT 
1200
GCAGTTGTAA GGCTAAGCTG TCCGTTGGAA ACTCATCCAG TTTCAAAGGT 
1250
GATACAAACG TTGAGGGAGA ATGAAGTTAT GCCTCATGAT TCCAACGTGG 
1300
CCATCACAGA GGAGGGTGTG GTTCACACAT TCACTCTCCG GCCTCAGGGT 
1350
GGCTGCACCG CTGAGCAGTT GAAGGACAAG CTCCTTGCCT CTCTATCACA 
1400
GTAA
1450

>AT4G16430.1 longest ORF length:467
MGQKFWENQE DRAMVESTIG SEACDFFIST ASASNTALSK LVSPPSDSNL 
50
QQGLRHVVEG SDWDYALFWL ASNVNSSDGC VLIWGDGHCR VKKGASGEDY 
100
SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC 
150
DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN 
200
SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA 
250
KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD 
300
EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD 
350
KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD 
400
AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG 
450
GCTAEQLKDK LLASLSQ
500