fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G16610 C2H2-like zinc finger protein (.1)

>AT4G16610.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 219
BglII A|GATCT 555
SacI GAGCT|C 472, 535
XhoI C|TCGAG 475


Click here to view TAIR data

>AT4G16610.1 length:615
ATGCAGAACA AACACAAATG CAAGCTCTGT TCCAAGAGTT TCTGTAATGG 
50
CAGAGCACTT GGTGGTCACA TGAAGTCTCA CTTGGTCTCA TCTCAGTCTT 
100
CAGCTCGGAA GAAACTAGGT GACTCGGTCT ATTCTTCTTC TTCCTCTTCC 
150
TCCGATGGTA AAGCGCTCGC CTACGGGTTA CGAGAGAACC CGAGGAAGAG 
200
TTTCCGGGTC TTTAATCCGG ATCCTGAGTC ATCCACAATT TACAACAGTG 
250
AGACAGAGAC CGAACCTGAA TCCGGAGACC CGGTTAAGAA ACGGGTCAGA 
300
GGAGATGTTT CAAAGAAGAA GAAGAAGAAG GCAAAGAGTA AGAGAGTGTT 
350
TGAGAACTCG AAGAAGCAAA AGACAATTCA CGAGTCACCA GAACCAGCGA 
400
GTTCTGTCTC TGATGGTTCT CCTGAACAAG ATTTAGCTAT GTGCTTGATG 
450
ATGCTGTCAA GAGATTCAAG GGAGCTCGAG ATTAAACTGA AAAAACCGGA 
500
GGAAGAGAGG AAGCCGGAAA AAAGACATTT CCCTGAGCTC CGTCGCTGTA 
550
TGATAGATCT GAATCTTCCT CCGCCGCAAG AAGCTGAAGC TGTCACCGTC 
600
GTTTCAGCCA TATAA
650

>AT4G16610.1 longest ORF length:204
MQNKHKCKLC SKSFCNGRAL GGHMKSHLVS SQSSARKKLG DSVYSSSSSS 
50
SDGKALAYGL RENPRKSFRV FNPDPESSTI YNSETETEPE SGDPVKKRVR 
100
GDVSKKKKKK AKSKRVFENS KKQKTIHESP EPASSVSDGS PEQDLAMCLM 
150
MLSRDSRELE IKLKKPEEER KPEKRHFPEL RRCMIDLNLP PPQEAEAVTV 
200
VSAI
250