fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G16750 Integrase-type DNA-binding superfamily protein (.1)

>AT4G16750.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
NheI G|CTAGC 291, 316
PvuII CAG|CTG 359


Click here to view TAIR data

>AT4G16750.1 length:540
ATGCAAGACT CTTCCTCTCA CGAATCGCAA CGTAACCTCC GGTCACCGGT 
50
GCCGGAGAAA ACCGGAAAGA GTTCTAAGAC TAAAAATGAG CAAAAAGGTG 
100
TTTCTAAACA ACCAAATTTT CGTGGGGTCA GAATGAGACA ATGGGGAAAA 
150
TGGGTGTCTG AAATTAGAGA ACCAAGAAAG AAATCAAGAA TATGGCTCGG 
200
TACTTTCTCT ACGCCGGAGA TGGCGGCGCG TGCACACGAC GTGGCGGCTT 
250
TAGCCATCAA AGGTGGCTCT GCCCACCTTA ATTTCCCGGA GCTAGCTTAC 
300
CATTTGCCGA GACCGGCTAG CGCGGACCCT AAAGACATTC AAGAAGCCGC 
350
CGCCGCAGCA GCTGCCGTTG ACTGGAAAGC ACCGGAGTCT CCGTCTAGCA 
400
CCGTGACGTC ATCTCCAGTC GCCGACGACG CTTTCTCCGA TCTTCCTGAT 
450
CTTTTGCTTG ACGTGAATGA TCACAACAAA AACGATGGAT TCTGGGACTC 
500
GTTTCCGTAC GAAGATCCTT TCTTCTTGGA AAATTACTAG 
550

>AT4G16750.1 longest ORF length:179
MQDSSSHESQ RNLRSPVPEK TGKSSKTKNE QKGVSKQPNF RGVRMRQWGK 
50
WVSEIREPRK KSRIWLGTFS TPEMAARAHD VAALAIKGGS AHLNFPELAY 
100
HLPRPASADP KDIQEAAAAA AAVDWKAPES PSSTVTSSPV ADDAFSDLPD 
150
LLLDVNDHNK NDGFWDSFPY EDPFFLENY
200