fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G17500 ATERF-1, AtERF1 ethylene responsive element binding factor 1 (.1)

>AT4G17500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 664
SacI GAGCT|C 695
SalI G|TCGAC 93


Click here to view TAIR data

>AT4G17500.1 length:807
ATGTCGATGA CGGCGGATTC TCAATCTGAT TATGCTTTTC TTGAGTCCAT 
50
ACGACGACAC TTACTAGGAG AATCGGAGCC GATACTCAGT GAGTCGACAG 
100
CGAGTTCGGT TACTCAATCT TGTGTAACCG GTCAGAGCAT TAAACCGGTG 
150
TACGGACGAA ACCCTAGCTT TAGCAAACTG TATCCTTGCT TCACCGAGAG 
200
CTGGGGAGAT TTGCCGTTGA AAGAAAACGA TTCTGAGGAT ATGTTAGTTT 
250
ACGGTATCCT CAACGACGCC TTTCACGGCG GTTGGGAGCC GTCTTCTTCG 
300
TCTTCCGACG AAGATCGTAG CTCTTTCCCG AGTGTTAAGA TCGAGACTCC 
350
GGAGAGTTTC GCGGCGGTGG ATTCTGTTCC GGTCAAGAAG GAGAAGACGA 
400
GTCCTGTTTC GGCGGCGGTG ACGGCGGCGA AGGGAAAGCA TTATAGAGGA 
450
GTGAGACAAA GGCCGTGGGG GAAATTTGCG GCGGAGATTA GAGACCCGGC 
500
GAAGAACGGA GCTAGGGTTT GGTTAGGAAC GTTTGAGACG GCGGAGGACG 
550
CGGCGTTGGC TTACGACAGA GCTGCTTTCA GGATGCGTGG TTCCCGCGCT 
600
TTGTTGAATT TTCCGTTGAG AGTTAATTCA GGAGAACCCG ACCCGGTTCG 
650
AATCAAGTCC AAGAGATCTT CTTTTTCTTC TTCTAACGAG AACGGAGCTC 
700
CGAAGAAGAG GAGAACGGTG GCCGCCGGTG GTGGAATGGA TAAGGGATTG 
750
ACGGTGAAGT GCGAGGTTGT TGAAGTGGCA CGTGGCGATC GTTTATTGGT 
800
TTTATAA
850

>AT4G17500.1 longest ORF length:268
MSMTADSQSD YAFLESIRRH LLGESEPILS ESTASSVTQS CVTGQSIKPV 
50
YGRNPSFSKL YPCFTESWGD LPLKENDSED MLVYGILNDA FHGGWEPSSS 
100
SSDEDRSSFP SVKIETPESF AAVDSVPVKK EKTSPVSAAV TAAKGKHYRG 
150
VRQRPWGKFA AEIRDPAKNG ARVWLGTFET AEDAALAYDR AAFRMRGSRA 
200
LLNFPLRVNS GEPDPVRIKS KRSSFSSSNE NGAPKKRRTV AAGGGMDKGL 
250
TVKCEVVEVA RGDRLLVL
300