fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G17570 GATA26 GATA transcription factor 26 (.1.2.3)

>AT4G17570.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 567, 1464
EcoRI G|AATTC 292
HindIII A|AGCTT 1117, 1389
PstI CTGCA|G 1424


Click here to view TAIR data

>AT4G17570.1 length:1533
ATGGGGAAGC AAGGACCTTG CTACCACTGT GGAGTTACAA ACACACCTTT 
50
GTGGAGAAAT GGACCACCAG AGAAGCCGGT ATTGTGCAAT GCGTGTGGAT 
100
CGCGTTGGAG GACAAAGGGA ACACTTGTGA ACTACACACC GCTTCATGCT 
150
CGTGCTGATG GTGATGAGAA TGATGATCAT CACAGGTTTC AAAGAATGAA 
200
GAGCATTTCT TTAGGCAATA AGAACAAAGA GATAAAGATG CTCAAGAGGA 
250
AAGCAATTCA AGAAAACATC ATCATTAAAA GACCGGTCTT TGAATTCAGT 
300
TATGGTTTGA AGGCGGCTGT GATAGAGGAG GATGCTAGTA ATAGATCGAG 
350
TTCCGGTTCG GCTGTATCAA ACTCTGAGAG CTGTGCACAG TTTAGCAGTG 
400
CAGATGGGAG TCCATCTCAA TCTAATGCGT GGGACACAAC TGTTCCTTGC 
450
AAGAGGAGGA CGTGTGTGGG CCGTCCTAAG TCCTCTTCTG TTGAAAAGCT 
500
CACAAAGGAC CTTTACAATA TTTTACAAGA GCAGCAATCG TCATGTCTCT 
550
CAGTTTCATC AGAGGAAGAT CTTCTTTTTG AGAATGAAAT GTCAATGGTC 
600
TCAGTTGAGA TTGGACATGG GAGTGTTCTG ATGAAGAATC CCCACTCGTT 
650
TGCTCGGGAA GAGGAGTCTG AAGCCAGCTC ACTCTCTTCG ATTGAGAACA 
700
AGTCCTCCAT CAGTGACGCA TACTCACATT CCGTGAAGCG TGTTGAGATT 
750
GGAGCAGTGA GAGGTTCATA TTATGGTGGA CAAACAATAA AGCAAGAACA 
800
ATTCAAGAGA ACCAAGTCTC AAACTGAAAG AGTGCATGTC CTGGGGAGTC 
850
ATGGTTCACC ACTATGTAGC ATAGATTTGA AGGATGTTTT CAACTTTGAT 
900
GAGTTCATAG AACAATTCAC AGAGGAAGAA CAGAAGAAAC TGATGAACTT 
950
GCTTCCTCAG ATTGACTCTG ATGACCTTCC TCATAGCCTC AGAATGATGT 
1000
TTGAAAGTGC TCAGTTCAAG GACAACTTCT CTTTGTTTCA GCAGCTCATT 
1050
GCTGATGGTG TCTTTGATGT GTCTTCTTCC TCGGGGGCAA AACTCGAAGA 
1100
AATCAGGACT TTTAAGAAGC TTGCTTTGAC AGATTTTAAC AAATCTCGTT 
1150
TGGTGGAAAG CTATAACCTC CTCAAGGAAC GCGAAAAAGG GACCGGAGAT 
1200
TCTGTTACTA CAACTTCAAA AAGCTCAATC CCAAATGTAC CTAAAAATAT 
1250
TGTAACCATT AAGAGGCGCT ATGAAAACCA AATCCAAGTA AAGTCAGAGT 
1300
CAAGGGGGCT AATGAGGAGC CCCAAAAGGG TGATGAAGAT GAAAGCAAGC 
1350
CATGAGACAG AGAACAATGT CTCATGCTTC AGACCAAGAA GCTTGGCTTC 
1400
TGTGTTTGCA CAAGAAGGTG GCTCTGCAGT GTTTAGCTAT GAAGGTAATT 
1450
GCAGTTCTGA TCAAGATCTC CTTCTTCTGG ACTTGCCGTC AAACGGGTCA 
1500
TTTCCTCAAG CAGAGCTACT TCACCAACTC TGA
1550

>AT4G17570.1 longest ORF length:510
MGKQGPCYHC GVTNTPLWRN GPPEKPVLCN ACGSRWRTKG TLVNYTPLHA 
50
RADGDENDDH HRFQRMKSIS LGNKNKEIKM LKRKAIQENI IIKRPVFEFS 
100
YGLKAAVIEE DASNRSSSGS AVSNSESCAQ FSSADGSPSQ SNAWDTTVPC 
150
KRRTCVGRPK SSSVEKLTKD LYNILQEQQS SCLSVSSEED LLFENEMSMV 
200
SVEIGHGSVL MKNPHSFARE EESEASSLSS IENKSSISDA YSHSVKRVEI 
250
GAVRGSYYGG QTIKQEQFKR TKSQTERVHV LGSHGSPLCS IDLKDVFNFD 
300
EFIEQFTEEE QKKLMNLLPQ IDSDDLPHSL RMMFESAQFK DNFSLFQQLI 
350
ADGVFDVSSS SGAKLEEIRT FKKLALTDFN KSRLVESYNL LKEREKGTGD 
400
SVTTTSKSSI PNVPKNIVTI KRRYENQIQV KSESRGLMRS PKRVMKMKAS 
450
HETENNVSCF RPRSLASVFA QEGGSAVFSY EGNCSSDQDL LLLDLPSNGS 
500
FPQAELLHQL 
550