Locus |
Common name |
Short description |
AT4G17695 |
KAN3, KANADI3 |
KANADI 3, Homeodomain-like superfamily protein (.1) |
>AT4G17695.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HindIII, HpaI, HpaII, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MspI, MwoI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, Tth111I, XbaI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
660, 814 |
AciI
| C|CGC |
449, 455, 468 |
AhdI
| GACNNN|NNGTC |
147 |
AluI
| AG|CT |
3, 442, 588, 775, 943 |
AlwNI
| CAGNNN|CTG |
914 |
AseI
| AT|TAAT |
208 |
BanII
| GPuGCPy|C |
488 |
BfaI
| C|TAG |
378 |
BglII
| A|GATCT |
253, 606 |
BsaHI
| GPu|CGPyC |
437 |
BsaJI
| C|CNNGG |
493 |
BslI
| CCNNNNN|NNGG |
279, 791 |
Bsp1286I
| G[GAT]GC[CAT]|C |
488 |
BspHI
| T|CATGA |
558 |
BsrGI
| T|GTACA |
531 |
BstF5I
| GGATGNN| |
498, 598 |
BstYI
| Pu|GATCPy |
253, 606 |
DdeI
| C|TNAG |
131 |
DpnI
| GA-CH3|TC |
37, 239, 252, 605, 708 |
DpnII
| |GATC |
37, 239, 252, 605, 708 |
Fnu4HI
| GC|NGC |
452 |
HincII
| GTPy|PuAC |
364, 371 |
HinfI
| G|ANTC |
231, 283, 299, 463, 845, 882 |
Hpy188I
| TCN|GA |
119, 132, 693, 879 |
Hpy99I
| CG[AT]CG| |
384, 508 |
HpyCH4III
| ACN|GT |
367, 427, 721, 869 |
HpyCH4IV
| A|CGT |
677 |
HpyCH4V
| TG|CA |
600 |
MboI
| |GATC |
37, 239, 252, 605, 708 |
MseI
| T|TAA |
207, 389, 414, 624 |
NlaIII
| CATG| |
374, 557, 620 |
NlaIV
| GGN|NCC |
489, 782 |
NspI
| PuCATG|Py |
375 |
RsaI
| GT|AC |
28, 530, 581 |
Sau3AI
| |GATC |
37, 239, 252, 605, 708 |
ScaI
| AGT|ACT |
582 |
SfcI
| C|TPuPyAG |
637 |
SmlI
| C|TPyPuAG |
249, 586, 768 |
StyI
| C|C[AT][AT]GG |
493 |
Taqƒ¿I
| T|CGA |
99, 237, 646, 847 |
TfiI
| G|A[AT]TC |
231, 283, 299, 463, 845, 882 |
TseI
| G|C[AT]GC |
452 |
Tsp509I
| |AATT |
404, 543 |
TspRI
| NNCA[CG]TGNN| |
358, 724 |
XcmI
| CCANNNNN|NNNNTGG |
502 |
Click here to view TAIR data
>AT4G17695.1 length:969
ATGGAGCTTT TCCCTTCACA ACCTGACTTG TACTTGAAGA TCAGCCGAAG | 50 |
AAGAGAAGAA GAACAAGAAA AAGAAAGTCA AGAACTACAA GAACAAGAAG | 100 |
TCGAAAGGAG ATTAGGGTTT CAGAGTAAAG CCTCAGATTT AGACAACAAG | 150 |
TCTTCAAATA ATCTCATCCA CACTCTCCAG TTCACTTCAA ACAATGAAGC | 200 |
CACCAAGATT AATAGTAATC AAGAACACAA GGAATCTCTC GATCAAGACT | 250 |
TGAGATCTAT TTTTATGATG AGACCAATAA GAGGAATCCC TCTTTACCAG | 300 |
AATCAAGTCC TTGACCACTA CTACTACTCA TCTACCTCTC CCAATCCTTT | 350 |
CTTCTTCAGT GAAGTCAACG GTCAACATGC TAGTCGTCGC TTAATCACAA | 400 |
ACCCTAATTG TAGTTTTAAT CTCCACAACC GTCATCGGCG TCAAGCTCAA | 450 |
CCGCAGCCGC CAAGATTCAC CGCCAAAAGA GGAGTAAGGG CTCCAAGGAT | 500 |
GCGGTGGACG ACGACCCTCC ACGCCCATTT TGTACACGCT GTTCAATTAT | 550 |
TGGGTGGTCA TGAAAGAGCA ACCCCAAAAT CAGTACTTGA GCTGATGGAT | 600 |
GTGCAAGATC TCACATTGGC TCATGTTAAA TCCCATCTAC AGATGTATCG | 650 |
AACCATCAAG TCTACTGAAA AACCTACAAC GTCATCAGGG CAGTCAGATT | 700 |
GTGAGAATGG ATCACAAGTA AACAGTGAGA GAGAAGCAAG AAATCTCACG | 750 |
GGTCTATGGA ATAACTCCTC AAGTGAAGCT CGGTTCCAGT TGAAGGCAAA | 800 |
GGCATCATCA GGTGTAGACA TTTCATCCAA TGAGAATGAA TGGAAGAATC | 850 |
GAAGATGTCC AAGCAACGAA CGGTTGTCGT CAGATTCGTC AAGCCTTACA | 900 |
GGGACAAGAC CAGAGACTGA AACTCCCAAT CTTGATTTCA CTTTAGCTAC | 950 |
ACCAAACCTC TCTCCCTAA | 1000 |
>AT4G17695.1 longest ORF length:322
MELFPSQPDL YLKISRRREE EQEKESQELQ EQEVERRLGF QSKASDLDNK | 50 |
SSNNLIHTLQ FTSNNEATKI NSNQEHKESL DQDLRSIFMM RPIRGIPLYQ | 100 |
NQVLDHYYYS STSPNPFFFS EVNGQHASRR LITNPNCSFN LHNRHRRQAQ | 150 |
PQPPRFTAKR GVRAPRMRWT TTLHAHFVHA VQLLGGHERA TPKSVLELMD | 200 |
VQDLTLAHVK SHLQMYRTIK STEKPTTSSG QSDCENGSQV NSEREARNLT | 250 |
GLWNNSSSEA RFQLKAKASS GVDISSNENE WKNRRCPSNE RLSSDSSSLT | 300 |
GTRPETETPN LDFTLATPNL SP | 350 |
|