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| Locus | Common name | Short description |
| AT4G17710 | HDG4 | homeodomain GLABROUS 4 (.1) |
>AT4G17710.1 CDS map
>>Show genomic map
Uncut enzymes: AfeI, AflII, AflIII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BamHI, BbsI, BbvCI, BbvI, BcgI, BciVI, BlpI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspMI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, MboII, MfeI, MluI, MlyI, MnlI, MslI, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PleI, PmeI, PpuMI, PshAI, PsiI, PspOMI, PstI, RsrII, SacI, SacII, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, SwaI, XbaI, XcmI, XmaI
| Name | Recognition sequence | Cut positions |
| AatII | GACGT|C | 2116 |
| Acc65I | G|GTACC | 1077 |
| AccI | GT|[AC][TG]AC | 1849 |
| AccII(FnuDII) | CG|CG | 1640, 2101 |
| AccIII(BspMII) | T|CCGGA | 336 |
| AciI | C|CGC | 553, 574, 1639, 2100 |
| AclI | AA|CGTT | 52, 269 |
| AhdI | GACNNN|NNGTC | 494 |
| AluI | AG|CT | 459, 582, 877, 886, 1012, 1090, 1180, 1464, 1662, 1866 |
| ApoI | Pu|AATTPy | 42 |
| AvaI | C|PyCGPuG | 731 |
| AvaII | G|G[AT]CC | 1020 |
| BalI | TGG|CCA | 543 |
| BanI | G|GPyPuCC | 1077 |
| BanII | GPuGCPy|C | 763 |
| BclI | T|GATCA | 1194 |
| BfaI | C|TAG | 288, 785, 1392 |
| BglI | GCCNNNN|NGGC | 990 |
| BglII | A|GATCT | 1670 |
| BsaAI | PyAC|GTPu | 1273, 1294 |
| BsaBI | GATNN|NNATC | 860 |
| BsaHI | GPu|CGPyC | 2116 |
| BsaJI | C|CNNGG | 644, 1422 |
| BsaWI | [AT]|CCGG[AT] | 336, 1202 |
| BsiEI | CGPuPy|CG | 1157 |
| BsiHKAI | G[AT]GC[AT]|C | 728, 1270 |
| BslI | CCNNNNN|NNGG | 428, 1947 |
| BsoBI | C|PyCGPuG | 731 |
| Bsp1286I | G[GAT]GC[CAT]|C | 728, 763, 1270 |
| BspDI | AT|CGAT | 1159 |
| BspEI | T|CCGGA | 336 |
| BspHI | T|CATGA | 213 |
| BspT107I(HgiCI) | G|G[TC][AG]CC | 1077 |
| BsrBI | GAG|CGG | 1329 |
| BsrDI | GCAATGNN| | 1236 |
| BssKI | |CCNGG | 202, 644, 1822, 1832 |
| BstF5I | GGATGNN| | 1140, 1389 |
| BstNI | CC|[AT]GG | 1832 |
| BstUI | CG|CG | 1640, 2101 |
| BstYI | Pu|GATCPy | 1670, 1887 |
| Cac8I | GCN|NGC | 568, 1869, 1985 |
| ClaI | AT|CGAT | 1159 |
| DdeI | C|TNAG | 994, 1252, 1660 |
| DpnI | GA-CH3|TC | 175, 587, 860, 997, 1156, 1165, 1193, 1631, 1669, 1753, 1886, 2039 |
| DpnII | |GATC | 175, 587, 860, 997, 1156, 1165, 1193, 1631, 1669, 1753, 1886, 2039 |
| DraI | TTT|AAA | 39 |
| EaeI | Py|GGCCPu | 543 |
| Fnu4HI | GC|NGC | 255, 598 |
| HaeII | PuGCGC|Py | 982, 1345 |
| HaeIII | GG|CC | 542, 840, 1336 |
| HhaI | GCG|C | 981, 1344, 2076, 2102 |
| HinP1I | G|CGC | 981, 1344, 2076, 2102 |
| HincII | GTPy|PuAC | 198, 1849, 2086, 2110 |
| HindIII | A|AGCTT | 878, 1091 |
| HinfI | G|ANTC | 296, 479, 494, 617, 1826, 1918, 1937, 2035 |
| HpaII | C|CGG | 201, 335, 644, 1201, 1821 |
| Hpy188I | TCN|GA | 45, 77, 146, 293, 806, 954, 995, 1040, 1496, 1751, 1893, 1944 |
| Hpy99I | CG[AT]CG| | 1847, 1856, 2114 |
| HpyCH4III | ACN|GT | 1352, 1539, 1845, 1992, 2049, 2068, 2082, 2089 |
| HpyCH4IV | A|CGT | 51, 268, 415, 1272, 1293, 1651, 2019, 2115 |
| HpyCH4V | TG|CA | 232, 454, 715, 892, 911, 1048, 1220, 1296, 1808, 1996 |
| KpnI | GGTAC|C | 1077 |
| MboI | |GATC | 175, 587, 860, 997, 1156, 1165, 1193, 1631, 1669, 1753, 1886, 2039 |
| MscI | TGG|CCA | 543 |
| MseI | T|TAA | 38, 318, 359, 1542, 2125 |
| MspA1I | C[AC]G|C[GT]G | 1663 |
| MspI | C|CGG | 201, 335, 644, 1201, 1821 |
| MwoI | GCNNNNN|NNGC | 529, 885, 990, 1344, 1710 |
| N.BstNBI | GAGTCNNNN|N | 499, 1831 |
| NciI | CC|[CG]GG | 202, 644, 1822 |
| NdeI | CA|TATG | 31 |
| NlaIII | CATG| | 212, 610, 901, 1260, 1399, 1678, 1806, 1873 |
| NlaIV | GGN|NCC | 1077 |
| NspI | PuCATG|Py | 1807 |
| PaeR7I | C|TCGAG | 731 |
| PflFI | GACN|NNGTC | 1855 |
| PflMI | CCANNNN|NTGG | 1947 |
| PmlI | CAC|GTG | 1294 |
| PspGI | |CC[AT]GG | 1832 |
| PvuI | CGAT|CG | 1157 |
| PvuII | CAG|CTG | 1663 |
| RsaI | GT|AC | 417, 1029, 1076, 1837 |
| SalI | G|TCGAC | 1849 |
| Sau3AI | |GATC | 175, 587, 860, 997, 1156, 1165, 1193, 1631, 1669, 1753, 1886, 2039 |
| Sau96I | G|GNCC | 1020 |
| ScrFI | CC|NGG | 202, 644, 1822, 1832 |
| SfcI | C|TPuPyAG | 1439 |
| SmlI | C|TPyPuAG | 731, 978 |
| SspI | AAT|ATT | 502 |
| StyI | C|C[AT][AT]GG | 1422 |
| Taqƒ¿I | T|CGA | 117, 177, 237, 558, 730, 1158, 1848, 1953, 2037 |
| TfiI | G|A[AT]TC | 296, 617, 1918, 1937 |
| TliI | C|TCGAG | 731 |
| TseI | G|C[AT]GC | 598 |
| Tsp45I | |GT[CG]AC | 751, 1257, 1469, 1596, 2022 |
| Tsp509I | |AATT | 41, 101, 128, 512, 735, 1508, 1769, 2123 |
| TspRI | NNCA[CG]TGNN| | 222, 1417, 1935, 1993, 2083 |
| Tth111I | GACN|NNGTC | 1855 |
| XhoI | C|TCGAG | 731 |
| XmnI | GAANN|NNTTC | 832, 1212, 1489 |
Click here to view TAIR data
>AT4G17710.1 length:2130
ATGGAAACGA AAGACAAGAA AGAAAAAGGA CATATGGTTT TAAATTCCGA | 50 |
CAACGTTTTC GGTTCGGTGT CTTCGTCTCC GACAACAACA ATCCAAAACC | 100 |
CTAATTACTT TACCTCCTTC GAGAACCCTA ATTTCCCTTA CATTTTTCCG | 150 |
AAAGAAGAGT ATGAGGTGAT GAGCAAGATC GAAAGCGGGT CGGGTAAGTC | 200 |
AACCGGGTCG GGTCATGACC CAGTGGAGAA TACTGCAATC GAACAAGAGC | 250 |
CTCCTGCGGC GAAGAAGAAA CGTTACCATA GACATACTGC TAGTCAGATT | 300 |
CAACAAATGG AAGCATTGTT TAAGGAAAAT GCTCATCCGG ATACCAAAAC | 350 |
AAGATTGAGA TTAAGTAAAA AACTTGGTCT CTCGCCGATA CAAGTCAAGT | 400 |
TTTGGTTTCA AAACAAACGT ACCCAAATCA AGGCACAACA AAGTAGAAGC | 450 |
GATAATGCAA AGCTAAAAGC AGAGAATGAG ACTCTAAAGA CAGAGAGTCA | 500 |
AAATATTCAG TCCAATTTTC AATGCCTTTT TTGCTCTACT TGTGGCCACA | 550 |
ATCTCCGCCT CGAAAACGCT CGCCTCCGCC AAGAGCTTGA TCGTTTACGC | 600 |
AGCATTGTTT CCATGAGGAA TCCTTCTCCT TCACAAGAGA TTACCCCGGA | 650 |
GACTAATAAG AACAACAACG ATAATATGTT GATTGCGGAA GAAGAAAAGG | 700 |
CGATTGATAT GGAACTTGCA GTTTCTTGTG CTCGAGAATT AGCAAAGATG | 750 |
TGTGACATAA ATGAGCCCTT GTGGAATAAG AAGAGACTAG ACAATGAGAG | 800 |
TGTGTGTCTG AATGAGGAAG AGTATAAGAA GATGTTCTTA TGGCCTCTAA | 850 |
TGAATGATGA TGATCGTTTT CGCAGAGAAG CTTCAAGAGC TAATGCAGTC | 900 |
ATCATGTTGA ACTGCATAAC CCTCGTCAAA GCATTCCTTG ATGCTGATAA | 950 |
ATGGTCGGAA ATGTTCTTCC CCATAGTCTC AAGCGCCAAA ACGGCTCAGA | 1000 |
TCATTTCTTC TGGAGCTTCT GGACCAAGTG GTACTCTTCT TCTGATGTTT | 1050 |
GCAGAGTTAC AAGTAGTGTC TCCATTGGTA CCAACAAGAG AAGCTTATTT | 1100 |
TCTTCGGTAT GTGGAGCAAA ATGCTGAAGA AGGAAAATGG ATGGTTGTAG | 1150 |
ATTTCCCGAT CGATAGGATC AAACCAGCAT CAGCTACTAC TACTGATCAA | 1200 |
TACCGGAGAA AACCTTCTGG TTGCATCATT CAAGCAATGC GTAACGGATA | 1250 |
CTCTCAGGTC ACATGGGTAG AGCACGTAGA AGTAGAAGAG AAGCACGTGC | 1300 |
AGGACGAGGT TGTTAGAGAG TTTGTGGAGA GCGGTGTGGC CTTTGGCGCT | 1350 |
GAACGGTGGC TATCTGTGTT GAAGAGACAA TGTGAAAGGA TGGCTAGTCT | 1400 |
CATGGCTACA AACATCACTG ACCTTGGAGT GATACCTTCT GTAGAAGCGA | 1450 |
GGAAGAACTT GATGAAGCTG TCACAGAGAA TGGTGAAAAC TTTCTGTCTG | 1500 |
AACATAATCA ATTCACACGG ACAAGCACCA ACAAAGGACA CAGTTAAAAT | 1550 |
CGTAAGCAGG AAAGTTTGCG GTGGTCTTGT TCCTTGTGCC GTGTCAGTCA | 1600 |
CGCTTCTCCC TTATTCTCAT CAACAAGTCT TTGATCTTCT CCGCGACAAT | 1650 |
CAACGTCTCT CTCAGCTGGA GATCTTGTTC ATGGGTAGTT CATTTCAAGA | 1700 |
AGTTGCTCAT ATCGCTAATG GCTCACATCT TGGAAATAGC ATCTCTCTTC | 1750 |
TTCGGATCAA TGTGGAGAGC AATTCATCGC ATAATGTAGA GTTGATGCTT | 1800 |
CAAGAAACAT GCACCGATAA CTCCGGGAGT CTCCTGGTGT ACTCTACCGT | 1850 |
CGACCCCGTC GCTGTTCAGC TCGCCATGAA CGGCGAAGAT CCTTCTGAAA | 1900 |
TACCACTTTT GCCCGTTGGA TTCTCTGTTG TTCCAGTGAA TCCATCCGAT | 1950 |
GGTGTCGAGG GCAGTTCCGT CAGTTCGCCT TCGTGCTTGC TCACTGTTGC | 2000 |
AATACAGGTC TTGGGGAGCA ACGTCACCAC CGAAAGACTC GATCTTTCCA | 2050 |
CCGTCTCCGT CATCAATCAC CGTATTTGCG CCACTGTCAA CCGTATCACT | 2100 |
TCCGCGCTCG TCAACGACGT CGGTAATTAA | 2150 |
>AT4G17710.1 longest ORF length:709
METKDKKEKG HMVLNSDNVF GSVSSSPTTT IQNPNYFTSF ENPNFPYIFP | 50 |
KEEYEVMSKI ESGSGKSTGS GHDPVENTAI EQEPPAAKKK RYHRHTASQI | 100 |
QQMEALFKEN AHPDTKTRLR LSKKLGLSPI QVKFWFQNKR TQIKAQQSRS | 150 |
DNAKLKAENE TLKTESQNIQ SNFQCLFCST CGHNLRLENA RLRQELDRLR | 200 |
SIVSMRNPSP SQEITPETNK NNNDNMLIAE EEKAIDMELA VSCARELAKM | 250 |
CDINEPLWNK KRLDNESVCL NEEEYKKMFL WPLMNDDDRF RREASRANAV | 300 |
IMLNCITLVK AFLDADKWSE MFFPIVSSAK TAQIISSGAS GPSGTLLLMF | 350 |
AELQVVSPLV PTREAYFLRY VEQNAEEGKW MVVDFPIDRI KPASATTTDQ | 400 |
YRRKPSGCII QAMRNGYSQV TWVEHVEVEE KHVQDEVVRE FVESGVAFGA | 450 |
ERWLSVLKRQ CERMASLMAT NITDLGVIPS VEARKNLMKL SQRMVKTFCL | 500 |
NIINSHGQAP TKDTVKIVSR KVCGGLVPCA VSVTLLPYSH QQVFDLLRDN | 550 |
QRLSQLEILF MGSSFQEVAH IANGSHLGNS ISLLRINVES NSSHNVELML | 600 |
QETCTDNSGS LLVYSTVDPV AVQLAMNGED PSEIPLLPVG FSVVPVNPSD | 650 |
GVEGSSVSSP SCLLTVAIQV LGSNVTTERL DLSTVSVINH RICATVNRIT | 700 |
SALVNDVGN | 750 |