|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT4G17750 | ATHSFA1A, ATHSF1, HSF1 | ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1A, ARABIDOPSIS THALIANA HEAT SHOCK FACTOR 1, heat shock factor 1 (.1) |
>AT4G17750.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 246, 348 |
| EcoRI | G|AATTC | 1300 |
| HindIII | A|AGCTT | 1441 |
| NdeI | CA|TATG | 1028, 1432 |
Click here to view TAIR data
>AT4G17750.1 length:1488
ATGTTTGTAA ATTTCAAATA CTTCTCTTTC TTTATCCGTA CGAAAATGGA | 50 |
CGGTGTTACC GGCGGAGGAA CGAATATCGG CGAGGCTGTG ACGGCGCCAC | 100 |
CACCGCGGAA TCCGCATCCA GCGACTTTAC TTAATGCGAA CTCTTTACCG | 150 |
CCCCCTTTCC TTAGCAAGAC GTATGACATG GTGGAAGATC CGGCGACGGA | 200 |
CGCGATTGTC TCATGGAGTC CGACGAACAA TAGCTTCATT GTTTGGGATC | 250 |
CACCGGAGTT TTCTCGTGAT CTTCTACCTA AATACTTCAA ACACAACAAT | 300 |
TTCTCCAGCT TTGTTCGCCA GTTAAACACC TATGGTTTTA GGAAAGTGGA | 350 |
TCCAGATCGA TGGGAATTTG CTAATGAAGG TTTCTTAAGA GGTCAAAAAC | 400 |
ATCTATTGAA GAAGATAAGC CGGAGAAAAT CTGTTCAGGG ACATGGTAGT | 450 |
AGTAGTAGTA ATCCACAATC TCAGCAATTA TCTCAGGGTC AAGGTTCAAT | 500 |
GGCTGCATTA TCTTCATGTG TTGAGGTTGG GAAATTTGGG TTAGAGGAAG | 550 |
AAGTTGAACA GCTTAAAAGA GACAAAAACG TGTTGATGCA GGAACTCGTT | 600 |
AAGTTACGCC AGCAGCAACA AACAACAGAT AATAAACTTC AGGTTTTGGT | 650 |
TAAACATCTT CAGGTTATGG AGCAGAGGCA ACAACAGATT ATGTCTTTCC | 700 |
TTGCTAAAGC TGTACAGAAT CCTACTTTCC TCTCTCAGTT TATACAGAAG | 750 |
CAGACTGATA GTAATATGCA TGTAACCGAG GCCAATAAGA AGCGGAGACT | 800 |
CAGAGAGGAT AGTACTGCTG CTACTGAGAG TAATAGTCAT AGCCATAGCT | 850 |
TGGAAGCATC AGATGGACAG ATAGTTAAGT ATCAGCCACT TAGAAACGAT | 900 |
TCAATGATGT GGAACATGAT GAAAACAGAT GATAAGTATC CGTTTCTTGA | 950 |
CGGGTTCTCA TCTCCAAACC AGGTATCAGG AGTCACTCTT CAAGAGGTAC | 1000 |
TACCCATAAC TTCAGGACAG TCACAGGCAT ATGCATCTGT ACCATCAGGA | 1050 |
CAGCCTTTAT CATACTTACC CTCTACTTCA ACTTCTCTCC CGGATACCAT | 1100 |
AATGCCAGAG ACTTCCCAGA TACCACAATT GACACGAGAG AGTATCAACG | 1150 |
ACTTCCCTAC AGAAAACTTC ATGGATACAG AGAAGAATGT TCCAGAGGCA | 1200 |
TTCATCTCTC CAAGCCCATT CCTTGATGGT GGTTCAGTCC CGATTCAGCT | 1250 |
TGAGGGAATA CCCGAAGACC CCGAGATTGA TGAACTAATG AGTAACTTTG | 1300 |
AATTCCTTGA AGAATATATG CCAGAAAGCC CAGTTTTTGG AGATGCAACT | 1350 |
ACACTAGAGA ACAACAACAA CAACAACAAC AACAACAACA ACAACAACAA | 1400 |
CAACAACAAC AACAACAACA CAAATGGTAG ACATATGGAT AAGCTTATAG | 1450 |
AAGAATTGGG TCTTCTCACA TCAGAAACAG AACACTAG | 1500 |
>AT4G17750.1 longest ORF length:495
MFVNFKYFSF FIRTKMDGVT GGGTNIGEAV TAPPPRNPHP ATLLNANSLP | 50 |
PPFLSKTYDM VEDPATDAIV SWSPTNNSFI VWDPPEFSRD LLPKYFKHNN | 100 |
FSSFVRQLNT YGFRKVDPDR WEFANEGFLR GQKHLLKKIS RRKSVQGHGS | 150 |
SSSNPQSQQL SQGQGSMAAL SSCVEVGKFG LEEEVEQLKR DKNVLMQELV | 200 |
KLRQQQQTTD NKLQVLVKHL QVMEQRQQQI MSFLAKAVQN PTFLSQFIQK | 250 |
QTDSNMHVTE ANKKRRLRED STAATESNSH SHSLEASDGQ IVKYQPLRND | 300 |
SMMWNMMKTD DKYPFLDGFS SPNQVSGVTL QEVLPITSGQ SQAYASVPSG | 350 |
QPLSYLPSTS TSLPDTIMPE TSQIPQLTRE SINDFPTENF MDTEKNVPEA | 400 |
FISPSPFLDG GSVPIQLEGI PEDPEIDELM SNFEFLEEYM PESPVFGDAT | 450 |
TLENNNNNNN NNNNNNNNNN NNNTNGRHMD KLIEELGLLT SETEH | 500 |