fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G17785 ATMYB39 myb domain protein 39 (.1)

>AT4G17785.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, HindIII, HpaI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 651
EcoRV GAT|ATC 193
KpnI GGTAC|C 811
NcoI C|CATGG 1075
NdeI CA|TATG 334
StyI C|C[AT][AT]GG 255, 827, 1075


Click here to view TAIR data

>AT4G17785.1 length:1083
ATGGGAAGAT CACCGTGTTG CGATCAAGAC AAAGGCGTGA AGAAAGGACC 
50
GTGGCTGCCA GAAGAAGATG ATAAGCTCAC TGCTTATATA AACGAGAATG 
100
GTTATGGGAA TTGGCGGTCG CTTCCTAAGC TCGCTGGACT TAACCGCTGT 
150
GGCAAGAGCT GTCGGCTCCG GTGGATGAAT TATCTCCGGC CTGATATCCG 
200
GAGAGGCAAA TTTTCCGATG GAGAAGAGAG TACTATCGTT AGACTCCATG 
250
CCCTCCTTGG CAACAAATGG TCGAAAATTG CGGGTCATCT TCCAGGAAGA 
300
ACAGATAATG AAATTAAAAA CTATTGGAAC ACTCATATGA GGAAGAAGTT 
350
ATTGCAAATG GGGATTGATC CAGTGACGCA CGAGCCAAGA ACCAACGATC 
400
TTAGCCCTAT CCTCGATGTT TCTCAAATGC TCGCGGCAGC AATCAACAAT 
450
GGCCAATTTG GTAACAATAA CCTCCTCAAC AATAACACCG CTTTGGAAGA 
500
TATTCTTAAA CTCCAATTGA TCCATAAAAT GCTTCAAATC ATAACCCCCA 
550
AAGCCATACC AAACATCAGT AGCTTCAAGA CCAATTTACT GAATCCTAAA 
600
CCAGAACCGG TAGTCAATAG CTTCAATACC AATTCAGTGA ATCCTAAACC 
650
GGATCCCCCG GCTGGTCTTT TCATAAACCA AAGTGGAATC ACTCCTGAGG 
700
CCGCCTCGGA TTTCATTCCA TCTTATGAAA ATGTTTGGGA TGGTTTTGAA 
750
GATAACCAGC TTCCTGGTTT GGTTACGGTT TCTCAAGAGA GTTTAAATAC 
800
AGCAAAACCG GGTACCAGTA CGACCACCAA GGTAAATGAT CATATCAGAA 
850
CCGGTATGAT GCCGTGTTAC TATGGTGATC AACTACTAGA AACCCCATCT 
900
ACTGGTTCGG TATCGGTCTC TCCCGAGACA ACCAGTTTGA ACCATCCCAG 
950
TACAGCTCAA CACTCATCCG GTTCAGATTT CCTAGAGGAC TGGGAGAAGT 
1000
TTCTTGATGA TGAAACAAGT GATTCTTGCT GGAAAAGTTT CTTAGACTTA 
1050
ACGTCACCCA CATCGTCACC TGTCCCATGG TAG
1100

>AT4G17785.1 longest ORF length:360
MGRSPCCDQD KGVKKGPWLP EEDDKLTAYI NENGYGNWRS LPKLAGLNRC 
50
GKSCRLRWMN YLRPDIRRGK FSDGEESTIV RLHALLGNKW SKIAGHLPGR 
100
TDNEIKNYWN THMRKKLLQM GIDPVTHEPR TNDLSPILDV SQMLAAAINN 
150
GQFGNNNLLN NNTALEDILK LQLIHKMLQI ITPKAIPNIS SFKTNLLNPK 
200
PEPVVNSFNT NSVNPKPDPP AGLFINQSGI TPEAASDFIP SYENVWDGFE 
250
DNQLPGLVTV SQESLNTAKP GTSTTTKVND HIRTGMMPCY YGDQLLETPS 
300
TGSVSVSPET TSLNHPSTAQ HSSGSDFLED WEKFLDDETS DSCWKSFLDL 
350
TSPTSSPVPW 
400