|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT4G17800 | Predicted AT-hook DNA-binding family protein (.1) |
>AT4G17800.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SmaI, SpeI, StyI, XbaI, XhoI
| Name | Recognition sequence | Cut positions |
| BamHI | G|GATCC | 268 |
| EcoRI | G|AATTC | 852 |
| PvuII | CAG|CTG | 764 |
| SacI | GAGCT|C | 329 |
| SalI | G|TCGAC | 130 |
Click here to view TAIR data
>AT4G17800.1 length:879
ATGGCTGGTC TTGATCTAGG CACAGCTTTT CGTTACGTTA ATCACCAGCT | 50 |
CCATCGTCCC GATCTCCACC TTCACCACAA TTCCTCCTCC GATGACGTCA | 100 |
CTCCCGGAGC CGGGATGGGT CATTTCACCG TCGACGACGA AGACAACAAC | 150 |
AACAACCATC AAGGTCTTGA CTTAGCCTCT GGTGGAGGAT CAGGAAGCTC | 200 |
TGGAGGAGGA GGAGGTCACG GCGGGGGAGG AGACGTCGTT GGTCGTCGTC | 250 |
CACGTGGCAG ACCACCGGGA TCCAAGAACA AACCGAAACC TCCGGTAATT | 300 |
ATCACGCGCG AGAGCGCAAA CACTCTAAGA GCTCACATTC TTGAAGTAAC | 350 |
AAACGGCTGC GATGTTTTCG ACTGCGTTGC GACTTATGCT CGTCGGAGAC | 400 |
AGCGAGGGAT CTGCGTTCTG AGCGGTAGCG GAACGGTCAC GAACGTCAGC | 450 |
ATACGTCAGC CATCTGCGGC TGGAGCGGTT GTGACGCTAC AAGGAACGTT | 500 |
CGAGATTCTT TCTCTCTCCG GATCGTTTCT TCCTCCTCCG GCACCTCCCG | 550 |
GAGCAACGAG TTTGACAATT TTCTTAGCCG GAGGACAAGG TCAGGTGGTT | 600 |
GGAGGAAGCG TTGTGGGTGA GCTTACGGCG GCTGGACCGG TGATTGTGAT | 650 |
TGCAGCTTCG TTTACTAATG TTGCTTATGA GAGACTTCCT TTAGAAGAAG | 700 |
ATGAGCAGCA GCAACAGCTT GGAGGAGGAT CTAACGGCGG AGGTAATTTG | 750 |
TTTCCGGAGG TGGCAGCTGG AGGAGGAGGA GGACTTCCGT TCTTTAATTT | 800 |
ACCGATGAAT ATGCAACCAA ATGTGCAACT TCCGGTGGAA GGTTGGCCGG | 850 |
GGAATTCCGG TGGAAGAGGT CCTTTCTGA | 900 |
>AT4G17800.1 longest ORF length:292
MAGLDLGTAF RYVNHQLHRP DLHLHHNSSS DDVTPGAGMG HFTVDDEDNN | 50 |
NNHQGLDLAS GGGSGSSGGG GGHGGGGDVV GRRPRGRPPG SKNKPKPPVI | 100 |
ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS | 150 |
IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV | 200 |
GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL | 250 |
FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF | 300 |