fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G17980 ANAC071 NAC domain containing protein 71 (.1)

>AT4G17980.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
SacI GAGCT|C 52
StyI C|C[AT][AT]GG 142
XhoI C|TCGAG 91


Click here to view TAIR data

>AT4G17980.1 length:789
ATGGGGAGTT CATGTTTGCC TCCAGGATTT AGATTTCATC CAACTGATGA 
50
AGAGCTCATA GGCTACTACT TGAGTAGAAA AATAGAAGGT CTCGAGATTG 
100
AGCTTGAAGT CATTCCTGTT ATCGACTTAT ACAAATTTGA TCCTTGGGAG 
150
TTGCCAGGTA AATCTTTCCT TCCAAATAGA GATTTGGAAT GGTTCTTTTT 
200
CTGTCCAAGA GACAAAAAAT ATGCAAACGG TTCTCGAACC AATAGGGCTA 
250
CAAAAGCGGG TTATTGGAAA GCAACTGGTA AAGACCGGAA AATCACTTGT 
300
AAATCATCGC ATGTTATAGC TGGATACCGA AAAACCTTAG TTTTCTATGA 
350
AGGTCGTGCC CCATTAGGCG ACAGAACTAA TTGGTTTATG CATGAATATC 
400
GTCTATGCGA TATTGATGAT CATTCACAAA AATCACCAAA TTTCAAGGGA 
450
GCTTTTGCGT TATGTCGCGT AGTTAAGAAG AATGAACTGA AGAAAAATTC 
500
GAAAAGTTTG AAAAATAAAA ACGAACAAGA CATTGGTTCT TGTTACTCTA 
550
GCCTCGCGAC CTCTCCTTGT CGCGATGAAG CGTCGCAGAT TCAATCGTTC 
600
AAGCCTTCTT CTACTACAAA CGACTCTTCA AGCATTTGGA TTTCTCCTGA 
650
TTTCATCCTT GATTCGTCAA AGGATTATCC TCAGATTAAG GAGGTTGCTT 
700
CTGAGTGCTT TCCCAACTAC CATTTTCCGG TCACCACGGC AAACCACCAC 
750
GTGGAATTTC CGCTACAAGA AATGTTGGTT CGTTCTTAG
800

>AT4G17980.1 longest ORF length:262
MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE 
50
LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC 
100
KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG 
150
AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF 
200
KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH 
250
VEFPLQEMLV RS
300