Locus |
Common name |
Short description |
AT4G17980 |
ANAC071 |
NAC domain containing protein 71 (.1) |
>AT4G17980.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
SacI
| GAGCT|C |
52 |
StyI
| C|C[AT][AT]GG |
142 |
XhoI
| C|TCGAG |
91 |
Click here to view TAIR data
>AT4G17980.1 length:789
ATGGGGAGTT CATGTTTGCC TCCAGGATTT AGATTTCATC CAACTGATGA | 50 |
AGAGCTCATA GGCTACTACT TGAGTAGAAA AATAGAAGGT CTCGAGATTG | 100 |
AGCTTGAAGT CATTCCTGTT ATCGACTTAT ACAAATTTGA TCCTTGGGAG | 150 |
TTGCCAGGTA AATCTTTCCT TCCAAATAGA GATTTGGAAT GGTTCTTTTT | 200 |
CTGTCCAAGA GACAAAAAAT ATGCAAACGG TTCTCGAACC AATAGGGCTA | 250 |
CAAAAGCGGG TTATTGGAAA GCAACTGGTA AAGACCGGAA AATCACTTGT | 300 |
AAATCATCGC ATGTTATAGC TGGATACCGA AAAACCTTAG TTTTCTATGA | 350 |
AGGTCGTGCC CCATTAGGCG ACAGAACTAA TTGGTTTATG CATGAATATC | 400 |
GTCTATGCGA TATTGATGAT CATTCACAAA AATCACCAAA TTTCAAGGGA | 450 |
GCTTTTGCGT TATGTCGCGT AGTTAAGAAG AATGAACTGA AGAAAAATTC | 500 |
GAAAAGTTTG AAAAATAAAA ACGAACAAGA CATTGGTTCT TGTTACTCTA | 550 |
GCCTCGCGAC CTCTCCTTGT CGCGATGAAG CGTCGCAGAT TCAATCGTTC | 600 |
AAGCCTTCTT CTACTACAAA CGACTCTTCA AGCATTTGGA TTTCTCCTGA | 650 |
TTTCATCCTT GATTCGTCAA AGGATTATCC TCAGATTAAG GAGGTTGCTT | 700 |
CTGAGTGCTT TCCCAACTAC CATTTTCCGG TCACCACGGC AAACCACCAC | 750 |
GTGGAATTTC CGCTACAAGA AATGTTGGTT CGTTCTTAG | 800 |
>AT4G17980.1 longest ORF length:262
MGSSCLPPGF RFHPTDEELI GYYLSRKIEG LEIELEVIPV IDLYKFDPWE | 50 |
LPGKSFLPNR DLEWFFFCPR DKKYANGSRT NRATKAGYWK ATGKDRKITC | 100 |
KSSHVIAGYR KTLVFYEGRA PLGDRTNWFM HEYRLCDIDD HSQKSPNFKG | 150 |
AFALCRVVKK NELKKNSKSL KNKNEQDIGS CYSSLATSPC RDEASQIQSF | 200 |
KPSSTTNDSS SIWISPDFIL DSSKDYPQIK EVASECFPNY HFPVTTANHH | 250 |
VEFPLQEMLV RS | 300 |
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