fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G18020 APRR2 PSEUDO-RESPONSE REGULATOR 2, CheY-like two-component responsive regulator family protein (.1.2.3.4.5.6)

>AT4G18020.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SmaI, StyI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 774
EcoRV GAT|ATC 453
PstI CTGCA|G 1237
SacI GAGCT|C 124
SalI G|TCGAC 682
SpeI A|CTAGT 880
XbaI T|CTAGA 1099


Click here to view TAIR data

>AT4G18020.2 length:1608
ATGGTCATTA CCGCTAACGA TTTATCAAAA TGGGAAAATT TTCCTAAAGG 
50
ACTTAAGGTT CTTCTTCTCC TCAACGGCTG TGACAGCGAC GGAGATGGCT 
100
CCTCAGCCGC CGAGACTCGA TCAGAGCTCG AATCAATGGA CTATATCGTT 
150
ACTACATTCA CCGATGAAAC TGAAGCACTC TCTGCGGTTG TCAAGAACCC 
200
GGAGAGCTTC CACATTGCCA TCGTCGAGGT GAATATGAGC GCTGAGAGTG 
250
AGAGTTTCAA GTTTCTTGAG GCTGCCAAAG ACGTTCTTCC TACTATAATG 
300
ATTTCAACCG ATCATTGCAT CACTACTACA ATGAAATGCA TAGCGCTTGG 
350
TGCAGTTGAG TTCCTACAAA AACCGCTCTC ACCGGAGAAA TTAAAGAACA 
400
TTTGGCAGCA TGTTGTTCAT AAGGCATTCA ATGATGGTGG AAGTAATGTT 
450
TCGATATCAC TTAAGCCAGT GAAAGAATCC GTTGTCTCGA TGCTTCATCT 
500
TGAGACCGAC ATGACAATCG AGGAGAAAGA TCCAGCGCCA TCAACACCGC 
550
AATTGAAACA AGATTCACGG TTACTAGACG GTGATTGCCA AGAGAACATA 
600
AATTTCTCGA TGGAAAATGT AAATTCCTCG ACCGAGAAAG ATAACATGGA 
650
AGATCATCAA GACATCGGTG AATCTAAATC AGTCGACACT ACAAACCGCA 
700
AATTAGATGA CGACAAAGTG GTTGTCAAAG AAGAGAGAGG AGACAGTGAA 
750
AAAGAAGAAG AAGGTGAAAC CGGAGATCTC ATAAGCGAGA AGACAGATTC 
800
AGTTGATATT CATAAGAAAG AAGATGAGAC TAAACCGATT AATAAATCAT 
850
CCGGGATCAA GAACGTGTCT GGTAACAAAA CTAGTCGAAA GAAGGTGGAT 
900
TGGACACCAG AGCTGCACAA GAAGTTTGTG CAAGCAGTTG AGCAACTCGG 
950
CGTTGATCAA GCGATACCCT CGCGGATTCT TGAGTTGATG AAAGTAGGCA 
1000
CCTTAACAAG ACACAATGTA GCTAGTCACC TTCAGAAATT TCGGCAGCAT 
1050
AGGAAGAATA TTCTTCCAAA GGATGATCAT AACCATAGAT GGATACAATC 
1100
TAGAGAGAAC CATAGACCAA ATCAACGTAA TTATAACGTT TTTCAACAGC 
1150
AACACCGTCC CGTGATGGCT TATCCCGTTT GGGGTCTTCC CGGTGTTTAT 
1200
CCGCCAGGAG CGATTCCACC TTTGTGGCCA CCGCCGCTGC AGTCCATTGG 
1250
TCAACCACCT CCGTGGCATT GGAAACCACC TTATCCAACG GTGAGCGGTA 
1300
ATGCATGGGG TTGTCCGGTT GGACCGCCTG TGACCGGATC ATATATTACT 
1350
CCTTCGAATA CTACCGCCGG CGGATTTCAA TATCCCAACG GAGCTGAAAC 
1400
CGGCTTCAAA ATAATGCCGG CGAGTCAGCC GGACGAGGAA ATGTTAGATC 
1450
AAGTGGTTAA AGAAGCGATA AGCAAACCGT GGCTGCCGCT ACCGCTCGGG 
1500
CTAAAACCGC CGTCCGCGGA GAGCGTTTTG GCTGAGCTAA CGCGTCAAGG 
1550
CATCTCAGCC GTCCCTTCTT CTTCTTGTCT AATCAACGGC TCTCATCGTC 
1600
TCCGCTGA
1650

>AT4G18020.2 longest ORF length:535
MVITANDLSK WENFPKGLKV LLLLNGCDSD GDGSSAAETR SELESMDYIV 
50
TTFTDETEAL SAVVKNPESF HIAIVEVNMS AESESFKFLE AAKDVLPTIM 
100
ISTDHCITTT MKCIALGAVE FLQKPLSPEK LKNIWQHVVH KAFNDGGSNV 
150
SISLKPVKES VVSMLHLETD MTIEEKDPAP STPQLKQDSR LLDGDCQENI 
200
NFSMENVNSS TEKDNMEDHQ DIGESKSVDT TNRKLDDDKV VVKEERGDSE 
250
KEEEGETGDL ISEKTDSVDI HKKEDETKPI NKSSGIKNVS GNKTSRKKVD 
300
WTPELHKKFV QAVEQLGVDQ AIPSRILELM KVGTLTRHNV ASHLQKFRQH 
350
RKNILPKDDH NHRWIQSREN HRPNQRNYNV FQQQHRPVMA YPVWGLPGVY 
400
PPGAIPPLWP PPLQSIGQPP PWHWKPPYPT VSGNAWGCPV GPPVTGSYIT 
450
PSNTTAGGFQ YPNGAETGFK IMPASQPDEE MLDQVVKEAI SKPWLPLPLG 
500
LKPPSAESVL AELTRQGISA VPSSSCLING SHRLR
550