| Locus |
Common name |
Short description |
| AT4G18450 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT4G18450.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BstAPI, BstBI, BstEII, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PvuI, PvuII, RsrII, SacI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XcmI, XhoI, XmaI
| Name |
Recognition sequence |
Cut positions |
| AccI
| GT|[AC][TG]AC |
189 |
| AccII(FnuDII)
| CG|CG |
457 |
| AciI
| C|CGC |
456, 595 |
| AclI
| AA|CGTT |
46, 414 |
| AluI
| AG|CT |
436, 484, 501, 520, 683 |
| ApoI
| Pu|AATTPy |
358, 495 |
| AvaI
| C|PyCGPuG |
302 |
| AvaII
| G|G[AT]CC |
197 |
| BfaI
| C|TAG |
23, 111, 159, 179 |
| BsaJI
| C|CNNGG |
349, 458 |
| BsaWI
| [AT]|CCGG[AT] |
554 |
| BsiHKAI
| G[AT]GC[AT]|C |
703 |
| BslI
| CCNNNNN|NNGG |
373 |
| BsoBI
| C|PyCGPuG |
302 |
| Bsp1286I
| G[GAT]GC[CAT]|C |
677, 703 |
| BspHI
| T|CATGA |
255 |
| BsrI
| ACTGGN| |
820 |
| BssKI
| |CCNGG |
200 |
| BssSI
| C|TCGTG |
716 |
| BstF5I
| GGATGNN| |
558, 660 |
| BstNI
| CC|[AT]GG |
200 |
| BstUI
| CG|CG |
457 |
| BstYI
| Pu|GATCPy |
35 |
| BtgI
| C|CPuPyGG |
349, 458 |
| DdeI
| C|TNAG |
681, 697 |
| DpnI
| GA-CH3|TC |
34, 87, 257, 578 |
| DpnII
| |GATC |
34, 87, 257, 578 |
| Fnu4HI
| GC|NGC |
363, 435, 456, 592 |
| HincII
| GTPy|PuAC |
189 |
| HinfI
| G|ANTC |
215, 282, 378, 713, 780 |
| HpaII
| C|CGG |
553 |
| Hpy188I
| TCN|GA |
64, 409, 576, 604, 708 |
| Hpy99I
| CG[AT]CG| |
190, 382 |
| HpyCH4III
| ACN|GT |
391, 510, 813, 831 |
| HpyCH4IV
| A|CGT |
45, 413, 572, 890 |
| HpyCH4V
| TG|CA |
311, 361, 424, 536, 804 |
| MboI
| |GATC |
34, 87, 257, 578 |
| MseI
| T|TAA |
263, 584, 630, 752 |
| MspA1I
| C[AC]G|C[GT]G |
458 |
| MspI
| C|CGG |
553 |
| MwoI
| GCNNNNN|NNGC |
432, 633 |
| NlaIII
| CATG| |
254, 285 |
| PsiI
| TTA|TAA |
515 |
| PspGI
| |CC[AT]GG |
200 |
| PstI
| CTGCA|G |
425 |
| RsaI
| GT|AC |
335, 474 |
| SacII
| CCGC|GG |
458 |
| SalI
| G|TCGAC |
189 |
| Sau3AI
| |GATC |
34, 87, 257, 578 |
| Sau96I
| G|GNCC |
197 |
| ScrFI
| CC|NGG |
200 |
| SfcI
| C|TPuPyAG |
425 |
| Taqƒ¿I
| T|CGA |
188, 219, 380, 504, 747 |
| TfiI
| G|A[AT]TC |
215, 282, 378, 780 |
| TseI
| G|C[AT]GC |
363, 435, 592 |
| Tsp509I
| |AATT |
56, 91, 357, 466, 494 |
| XbaI
| T|CTAGA |
112, 160 |
| XmnI
| GAANN|NNTTC |
170 |
Click here to view TAIR data
>AT4G18450.1 length:912
ATGGCTTTTG GCAATATCCA AGAACTAGAC GGCGAGATCC TAAAGAACGT | 50 |
TTGGGCGAAT TACATCGGAA CACCACAAAC CGATACAAGA TCAATTCAAG | 100 |
TTCCAGAAGT TTCTAGAACT TGGGAAGCGT TGCCTACCCT TGATGACATA | 150 |
CCAGAAGGTT CTAGAGAAAT GCTTCAAAGC CTAGATATGT CGACGGAGGA | 200 |
CCAGGAATGG ACAGAGATTC TCGATGCTAT TGCTTCTTTC CCAAACAAAA | 250 |
CCAATCATGA TCCATTAACC AACCCTACCA TTGATTCATG TTCTTTGTCT | 300 |
TCTCGGGTTT CTTGCAAAAC AAGAAAATAC AGGGGAGTAC GGAAGCGTCC | 350 |
GTGGGGGAAA TTTGCAGCCG AAATCAGGGA TTCGACGAGA AACGGTGTTA | 400 |
GGGTTTGGCT CGGAACGTTC CAAACTGCAG AGGAAGCAGC TATGGCTTAC | 450 |
GATAAAGCCG CGGTTAGAAT TAGAGGTACT CAAAAAGCTC ACACAAATTT | 500 |
TCAGCTCGAA ACAGTTATAA AAGCTATGGA AATGGATTGC AACCCAAACT | 550 |
ACTACCGGAT GAACAACTCA AATACGTCCG ATCCATTAAG AAGCAGCCGC | 600 |
AAAATCGGAT TGAGAACAGG AAAAGAGGCG GTTAAGGCTT ATGATGAAGT | 650 |
CGTTGATGGG ATGGTTGAAA ACCATTGTGC CCTTAGCTAT TGTTCAACTA | 700 |
AGGAGCACTC GGAGACTCGT GGTTTGCGTG GGAGTGAAGA AACTTGGTTC | 750 |
GATTTAAGAA AGAGACGAAG GAGTAATGAA GATTCTATGT GTCAAGAAGT | 800 |
TGAAATGCAG AAGACGGTTA CTGGAGAAGA GACAGTATGT GATGTGTTTG | 850 |
GTTTGTTTGA GTTTGAGGAT TTGGGAAGTG ATTATTTGGA GACGTTATTA | 900 |
TCTTCTTTTT GA | 950 |
>AT4G18450.1 longest ORF length:303
MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI | 50 |
PEGSREMLQS LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS | 100 |
SRVSCKTRKY RGVRKRPWGK FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY | 150 |
DKAAVRIRGT QKAHTNFQLE TVIKAMEMDC NPNYYRMNNS NTSDPLRSSR | 200 |
KIGLRTGKEA VKAYDEVVDG MVENHCALSY CSTKEHSETR GLRGSEETWF | 250 |
DLRKRRRSNE DSMCQEVEMQ KTVTGEETVC DVFGLFEFED LGSDYLETLL | 300 |
SSF | 350 |
|