fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G18450 Integrase-type DNA-binding superfamily protein (.1)

>AT4G18450.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
PstI CTGCA|G 425
SalI G|TCGAC 189
XbaI T|CTAGA 112, 160


Click here to view TAIR data

>AT4G18450.1 length:912
ATGGCTTTTG GCAATATCCA AGAACTAGAC GGCGAGATCC TAAAGAACGT 
50
TTGGGCGAAT TACATCGGAA CACCACAAAC CGATACAAGA TCAATTCAAG 
100
TTCCAGAAGT TTCTAGAACT TGGGAAGCGT TGCCTACCCT TGATGACATA 
150
CCAGAAGGTT CTAGAGAAAT GCTTCAAAGC CTAGATATGT CGACGGAGGA 
200
CCAGGAATGG ACAGAGATTC TCGATGCTAT TGCTTCTTTC CCAAACAAAA 
250
CCAATCATGA TCCATTAACC AACCCTACCA TTGATTCATG TTCTTTGTCT 
300
TCTCGGGTTT CTTGCAAAAC AAGAAAATAC AGGGGAGTAC GGAAGCGTCC 
350
GTGGGGGAAA TTTGCAGCCG AAATCAGGGA TTCGACGAGA AACGGTGTTA 
400
GGGTTTGGCT CGGAACGTTC CAAACTGCAG AGGAAGCAGC TATGGCTTAC 
450
GATAAAGCCG CGGTTAGAAT TAGAGGTACT CAAAAAGCTC ACACAAATTT 
500
TCAGCTCGAA ACAGTTATAA AAGCTATGGA AATGGATTGC AACCCAAACT 
550
ACTACCGGAT GAACAACTCA AATACGTCCG ATCCATTAAG AAGCAGCCGC 
600
AAAATCGGAT TGAGAACAGG AAAAGAGGCG GTTAAGGCTT ATGATGAAGT 
650
CGTTGATGGG ATGGTTGAAA ACCATTGTGC CCTTAGCTAT TGTTCAACTA 
700
AGGAGCACTC GGAGACTCGT GGTTTGCGTG GGAGTGAAGA AACTTGGTTC 
750
GATTTAAGAA AGAGACGAAG GAGTAATGAA GATTCTATGT GTCAAGAAGT 
800
TGAAATGCAG AAGACGGTTA CTGGAGAAGA GACAGTATGT GATGTGTTTG 
850
GTTTGTTTGA GTTTGAGGAT TTGGGAAGTG ATTATTTGGA GACGTTATTA 
900
TCTTCTTTTT GA
950

>AT4G18450.1 longest ORF length:303
MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI 
50
PEGSREMLQS LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS 
100
SRVSCKTRKY RGVRKRPWGK FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY 
150
DKAAVRIRGT QKAHTNFQLE TVIKAMEMDC NPNYYRMNNS NTSDPLRSSR 
200
KIGLRTGKEA VKAYDEVVDG MVENHCALSY CSTKEHSETR GLRGSEETWF 
250
DLRKRRRSNE DSMCQEVEMQ KTVTGEETVC DVFGLFEFED LGSDYLETLL 
300
SSF
350