Locus |
Common name |
Short description |
AT4G18450 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT4G18450.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
PstI
| CTGCA|G |
425 |
SalI
| G|TCGAC |
189 |
XbaI
| T|CTAGA |
112, 160 |
Click here to view TAIR data
>AT4G18450.1 length:912
ATGGCTTTTG GCAATATCCA AGAACTAGAC GGCGAGATCC TAAAGAACGT | 50 |
TTGGGCGAAT TACATCGGAA CACCACAAAC CGATACAAGA TCAATTCAAG | 100 |
TTCCAGAAGT TTCTAGAACT TGGGAAGCGT TGCCTACCCT TGATGACATA | 150 |
CCAGAAGGTT CTAGAGAAAT GCTTCAAAGC CTAGATATGT CGACGGAGGA | 200 |
CCAGGAATGG ACAGAGATTC TCGATGCTAT TGCTTCTTTC CCAAACAAAA | 250 |
CCAATCATGA TCCATTAACC AACCCTACCA TTGATTCATG TTCTTTGTCT | 300 |
TCTCGGGTTT CTTGCAAAAC AAGAAAATAC AGGGGAGTAC GGAAGCGTCC | 350 |
GTGGGGGAAA TTTGCAGCCG AAATCAGGGA TTCGACGAGA AACGGTGTTA | 400 |
GGGTTTGGCT CGGAACGTTC CAAACTGCAG AGGAAGCAGC TATGGCTTAC | 450 |
GATAAAGCCG CGGTTAGAAT TAGAGGTACT CAAAAAGCTC ACACAAATTT | 500 |
TCAGCTCGAA ACAGTTATAA AAGCTATGGA AATGGATTGC AACCCAAACT | 550 |
ACTACCGGAT GAACAACTCA AATACGTCCG ATCCATTAAG AAGCAGCCGC | 600 |
AAAATCGGAT TGAGAACAGG AAAAGAGGCG GTTAAGGCTT ATGATGAAGT | 650 |
CGTTGATGGG ATGGTTGAAA ACCATTGTGC CCTTAGCTAT TGTTCAACTA | 700 |
AGGAGCACTC GGAGACTCGT GGTTTGCGTG GGAGTGAAGA AACTTGGTTC | 750 |
GATTTAAGAA AGAGACGAAG GAGTAATGAA GATTCTATGT GTCAAGAAGT | 800 |
TGAAATGCAG AAGACGGTTA CTGGAGAAGA GACAGTATGT GATGTGTTTG | 850 |
GTTTGTTTGA GTTTGAGGAT TTGGGAAGTG ATTATTTGGA GACGTTATTA | 900 |
TCTTCTTTTT GA | 950 |
>AT4G18450.1 longest ORF length:303
MAFGNIQELD GEILKNVWAN YIGTPQTDTR SIQVPEVSRT WEALPTLDDI | 50 |
PEGSREMLQS LDMSTEDQEW TEILDAIASF PNKTNHDPLT NPTIDSCSLS | 100 |
SRVSCKTRKY RGVRKRPWGK FAAEIRDSTR NGVRVWLGTF QTAEEAAMAY | 150 |
DKAAVRIRGT QKAHTNFQLE TVIKAMEMDC NPNYYRMNNS NTSDPLRSSR | 200 |
KIGLRTGKEA VKAYDEVVDG MVENHCALSY CSTKEHSETR GLRGSEETWF | 250 |
DLRKRRRSNE DSMCQEVEMQ KTVTGEETVC DVFGLFEFED LGSDYLETLL | 300 |
SSF | 350 |
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