Locus |
Common name |
Short description |
AT4G18960 |
AG |
AGAMOUS, K-box region and MADS-box transcription factor family protein (.1.2) |
>AT4G18960.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
140 |
SacI
| GAGCT|C |
148, 415, 478 |
Click here to view TAIR data
>AT4G18960.1 length:759
ACGGCGTACC AATCGGAGCT AGGAGGAGAT TCCTCTCCCT TGAGGAAATC | 50 |
TGGGAGAGGA AAGATCGAAA TCAAACGGAT CGAGAACACA ACGAATCGTC | 100 |
AAGTCACTTT TTGCAAACGT AGAAATGGTT TGCTCAAGAA AGCTTACGAG | 150 |
CTCTCTGTTC TTTGTGATGC TGAAGTCGCA CTCATCGTCT TCTCTAGCCG | 200 |
TGGTCGTCTC TATGAGTACT CTAACAACAG TGTAAAAGGG ACTATTGAGA | 250 |
GGTACAAGAA GGCAATATCG GACAATTCTA ACACCGGATC GGTGGCAGAA | 300 |
ATTAATGCAC AGTATTATCA ACAAGAATCA GCCAAATTGC GTCAACAAAT | 350 |
AATCAGCATA CAAAACTCCA ACAGGCAATT GATGGGTGAG ACGATAGGGT | 400 |
CAATGTCTCC CAAAGAGCTC AGGAACTTGG AAGGCAGATT AGAGAGAAGT | 450 |
ATTACCCGAA TCCGATCCAA GAAGAATGAG CTCTTATTTT CTGAAATCGA | 500 |
CTACATGCAG AAAAGAGAAG TTGATTTGCA TAACGATAAC CAGATTCTTC | 550 |
GTGCAAAGAT AGCTGAAAAT GAGAGGAACA ATCCGAGTAT AAGTCTAATG | 600 |
CCAGGAGGAT CTAACTACGA GCAGCTTATG CCACCACCTC AAACGCAATC | 650 |
TCAACCGTTT GATTCACGGA ATTATTTCCA AGTCGCGGCA TTGCAACCTA | 700 |
ACAATCACCA TTACTCATCC GCGGGTCGCC AAGACCAAAC CGCTCTCCAG | 750 |
TTAGTGTAA | 800 |
>AT4G18960.1 longest ORF length:252
TAYQSELGGD SSPLRKSGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE | 50 |
LSVLCDAEVA LIVFSSRGRL YEYSNNSVKG TIERYKKAIS DNSNTGSVAE | 100 |
INAQYYQQES AKLRQQIISI QNSNRQLMGE TIGSMSPKEL RNLEGRLERS | 150 |
ITRIRSKKNE LLFSEIDYMQ KREVDLHNDN QILRAKIAEN ERNNPSISLM | 200 |
PGGSNYEQLM PPPQTQSQPF DSRNYFQVAA LQPNNHHYSS AGRQDQTALQ | 250 |
LV | 300 |
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