fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G18960 AG AGAMOUS, K-box region and MADS-box transcription factor family protein (.1.2)

>AT4G18960.2 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, KpnI, NcoI, NheI, NotI, PvuII, SalI, SmaI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 7471
BglII A|GATCT 2593, 5582, 5698, 5910
EcoRI G|AATTC 667, 10147
EcoRV GAT|ATC 454, 10473
HindIII A|AGCTT 2044, 5200, 10131, 10868
HpaI GTT|AAC 466
NdeI CA|TATG 3993, 8601
PacI TTAAT|TAA 4029, 8406
PstI CTGCA|G 3449, 10349
SacI GAGCT|C 722, 5208, 8663, 8812
SpeI A|CTAGT 1740, 2161, 6563
XbaI T|CTAGA 4720, 7389


Click here to view TAIR data

>AT4G18960 genomic sequence (5061-5290,8290-8371,8474-8535,8623-8722,8809-8850,8935-8976,9107-9303,9413-9416,) length:11183
tatcacaaaa gaatacatac accaagattc aagaatatga aaacacacat 
50
ataatataga catttttaag agggtcccaa aaacaggctc ttgatctgga 
100
aactgtatta atttgtatcc aattataacc tcatgggcca cttttccctg 
150
gctatgcaca ttatcatagg ttatacgatt aagttcgtga tggaaaatat 
200
gatttattaa agttttcttc ccgagtttgc aacgattttc ctttcttcaa 
250
aatctaaaat ttattcgatt aacaaaaaaa acaattatcg acaagcaatt 
300
caaaggaaaa attgtgaaaa aacaaaagaa taaggagaga atatgtcctc 
350
cttctgtttt tttttactaa gagagaatat atctttaata ggggatgctt 
400
cttgctcgaa gccatcattg agaagacctt catacttgcg ggagtctatg 
450
atagatatct caagagttaa ctttagatac ttttatgcga tttcatttta 
500
tttttaatga cttactataa taattattat tttttcatct aaataattca 
550
attcacgaaa tcatcttaat tattatttat ataaatacat ggacaaatag 
600
aagtggaaga acaatgttta gaaaacaaat cgaaaaagat cgccgacctt 
650
tattgatcga ggaagagaat tctggtggga ttttagaggg aggtaagagc 
700
ataggtgcta gagagtgttc ggagctcgga aaatgattaa aattggtttt 
750
gattacactt aattagttta atcttctagt aacacacaaa tatgctaaaa 
800
taaacacata atacattcat gcaaacacaa aacttggctt aatattggcc 
850
aataatttga gtggcacaat cacaatcaag ccaaaagcag cactgatttc 
900
tctttttttt tttctttcta attagtctta attcggtcca aaaccaaaca 
950
aaaatatctt taaattatat tggaacctga cgaaaacaaa tcttaaattc 
1000
ccacaaaatg ctatatatat agtatctaag tttgaatgcc aattccatat 
1050
ttttacggaa tttataaaag tacgcagaat ctatttctag cagtttggaa 
1100
aattttcaaa atatttgaaa attttcaaat ggtttgtggt ctgttgatct 
1150
actaatcacg tcatactaat tttgggatgg aatgttacag aatatataat 
1200
ttcaaaacag agagagtatt cttttgtttt ctgtgaactg attttattct 
1250
aggtaatata atgtatccat tttttttaat gacgaggaag aaaaattaag 
1300
gaacaaaaga atatgcatta aatttgatta ggtagtgtca tttaagtgat 
1350
cccttctcca acacaaaatg tatgattcga cgtcaaatta atgttttaaa 
1400
tatttattgc ttttattgat catatataat ttaatattta taatcattat 
1450
tacgtgggaa cttatctagt acacattcta tgtctttgtg aacttagtac 
1500
acgagtaacg gtttttctat taaattaaaa ccttcaaaac aacatttgat 
1550
gaaaatttca tagattttac accaaaattt cgtaagaaaa attgttggag 
1600
ttcgtattgt tttcttgtag tagatgacat taaaaaaata cattaagata 
1650
cactaaacaa gaattatgca tattgttttt tggtcaaaat cgagccttta 
1700
ccaaattgat cgatacattt tttctgatga tacgtttaga ctagttggat 
1750
aaaatattaa tctgtcctca aaaccaattt gcagtggatc aatccatata 
1800
tcttctatat tattaggatc tttgtctaac ttccgatgtg tgatattgtt 
1850
attcctaaga taaaacacca ttgaaaaaca gtattttaaa tcgggtaaat 
1900
aattcagcga gtcacatatt tttgttttaa taaaaactca aatcaaaagt 
1950
gatcaaaata tggtagaaag caaccttcga ttgtggtcca tcatgtaaga 
2000
tacgagaaga ttttatggtt tttaaaaccc acttcgacca tgaaagcttg 
2050
acccaaagca attgagttgt ttcttttata aatgacctaa tcaatttcca 
2100
tacatacaag catacatgtg acgtaaagga aatctaatta tgtactaatt 
2150
tgtaaatttt actagtattc aattcagtaa ttcttactaa acttacttta 
2200
actcttgcta attaaatata ctactagaga aggtaaatta catgcagtta 
2250
agctatacta ttttttctaa ttgcaagaaa gaaagaaaaa gtacaaaaga 
2300
aaagaaagca cattgcaagt ggatgtatat atagttatag ggaaataaat 
2350
atgaatatgg actgtatata catataggtt tctcttatct ctatcaaatt 
2400
accttaaatg ggttcataaa gatggagatc aaagactaca catcacatgc 
2450
tactctccct cttcttttgg cataacctta ctccatttat acattgtgct 
2500
cctcaattat tcaacatttt ttaaaaataa cttatttaac aaaatgttag 
2550
aaaatatcta cccaattttt ttcttccaca tacgagctac aaagatcttt 
2600
atcaaataaa acaagaaaga ttattaatcc atattttggg ttaaatttta 
2650
atccatttag ccaattagga gaactatttt aacagttaga tacttttcaa 
2700
caaaatttat taagtagtca cctatgtata ttcatatagt agtttcacaa 
2750
acaatatgga gagctgtgat cttgaagagg gcgacaaaag tcaaaaagaa 
2800
aatgtaaaaa aagagagaga gattaaagta gttggagaag agagaaaagt 
2850
ctggttacct tctaattgag tcagaagcat tacacttaaa taactttcca 
2900
aattaagccc tacgtcttgt ccagcccctt aaaagtacgc ttcatctccc 
2950
tatttcccct ataaacccta aaaccctatt tatcttatta atttatcatt 
3000
ttttttatat gtcaatatca caacaagtaa acatcatcaa cttcaaatct 
3050
cactaacata aatagtatgc taattttctt cactatctga gtaattttct 
3100
ccttcttttt acatcattcg attctatatt tgccacacca ttaaatagat 
3150
aagtatattg gttcttacta ctaataatca gtttagccat atatctaatt 
3200
acacagtttt cttttatatg ttactttata tttgtacacc atcagttact 
3250
atatacggaa taaattacac ctcatcatgt aattacaata ttatcataaa 
3300
ttttttgaaa ttctattctt taatattttc agtatccaga atccattttc 
3350
ttatatttat tctggcaaaa taatgtaaaa tggtatcaaa tatacaacac 
3400
catatatttg tttataaata acttccttaa ttagtgaaac aaattttcct 
3450
gcagaatgtc acttaaatct ttaaaacaat tcacaaaaga aaagggaata 
3500
gagctgaaat tttttcctct ttaaaaagat caagatttag taaaaactag 
3550
aaacaaagaa gaagatcgat atttgttgta acaaaaaaat gtactgatca 
3600
gatttaccca aagattttag tgcctcaaaa actttcacat gaaaagcaaa 
3650
gacaagtaat ggtaagtaga gtctgcatct catgagtgat tgcccaactt 
3700
gaaccctctt ttcatttaga cctttgtgaa agaccacaca agaactaccc 
3750
accaataact ctctcttttt ttcttcattt ccaaaaacta tttattcatt 
3800
tctacaattt ctcaatttgg gggtgtcctt aataagtatt atatttatga 
3850
aaagtccgga tgtatggtgg gtgttattta tggtaattaa cactatttat 
3900
taataatatt tttcatgtga tttcaaaagc tgatgtactc atgctttgtg 
3950
aacctttaga ttgctctatg tcaatctttt attttaacct atcatatgtc 
4000
taaatgtact gaaaagaaac accagtttaa ttaattatac ttccctcata 
4050
tataactatc aaccaagtac aaaacttttg tcaattctca aaatcaactt 
4100
tcaccacata attatctaac atgtgtatgt tccaaaacca gtttaaatag 
4150
aattactttt cagaaaatac atgtatatta actctatcta ataaagaaga 
4200
aacacatact tatctcatag attccattca taaaactatg ctttagtgag 
4250
taagaaaacc agtaatcaaa cacaaattga caagacacta tatggatgta 
4300
aaaagtgggg aaaaatggtg ataaatagta gagaaaatta aaaagaaaaa 
4350
aaatattcct ttataaatgt atatacccat ctcttcacca gcacaacctt 
4400
accttccatt ttctgcaact tctccaaatc tcatactttc cagaaaatca 
4450
ttttcccaag aaaaataaaa ctttcccctt tgttcttctc cccccaacag 
4500
gtcaggctag tattttgttg ttccccaatc ctttcaaaca ttatcttctt 
4550
cataatatta ctttgcttca cttcttttgg tccttaaacc aaatttttgt 
4600
tcttctttag tttccttttt tcccgttttg atttgattct ttttatgtta 
4650
tttagagaga aacaagattc acaaattctc tgatcttctt taactcttta 
4700
aaacttttct ttttcacact ctagatttaa attatcccta tggttacaaa 
4750
acaattttgt tcttagttta taacttgtgt attaccatcc tttcttgatt 
4800
aactcttgtt aggagaatat gaatgtaaga tcaataaagt tcttcaactt 
4850
tataattcct tctataagat gtgtgtcggc aacagaatta aattaaatct 
4900
ttatagttta actttaatct caaccataat tcaaaagaat agaaaacatg 
4950
aagaatcttg agtcttttca agaaaatctt gattggtttt ttgttggatt 
5000
cttgtaattc tgtactaatc aaattttgcc ctaaacgttt ttggctttgg 
5050
agcagcaatc ACGGCGTACC AATCGGAGCT AGGAGGAGAT TCCTCTCCCT 
5100
TGAGGAAATC TGGGAGAGGA AAGATCGAAA TCAAACGGAT CGAGAACACA 
5150
ACGAATCGTC AAGTCACTTT TTGCAAACGT AGAAATGGTT TGCTCAAGAA 
5200
AGCTTACGAG CTCTCTGTTC TTTGTGATGC TGAAGTCGCA CTCATCGTCT 
5250
TCTCTAGCCG TGGTCGTCTC TATGAGTACT CTAACAACAG gtttcttctt 
5300
cttctcgtgc tctgttctta ctttattaat aattaaatta tttttaaagt 
5350
ccgatttagg gttttatgtt tatgttaaag cataaatctt ttacgagggt 
5400
tttcgatctt ctaagctaga tttgattctc ttcttcttga atgctcttat 
5450
gggtaggatt atttttcact tttttccttc atattccaca cacatatata 
5500
tataaacaca ctaacattag tgggaatatt tgtttgatat gtttatttta 
5550
tttacttcgg gggtttttgt aacaattttg tagatctaat ttcttgttct 
5600
tcatgtgtat attaattttc ccttaagact taaataaaaa gagagaattt 
5650
gttatatata gatatatgaa gtgagggaaa tggtacaaag ttaaaggaga 
5700
tctgagtgag agttagataa taaatgaaaa gaaataagaa accatcaggg 
5750
ttttttctaa tgtggagttt tagattcagt tttgtagaac taagattcac 
5800
tttgttgggt gttctttctt cactcatttc tgttattata ataataataa 
5850
aatcttatat ctttctattt tccttactaa caagtacttg aagatttaga 
5900
tatatttata gatctggtgt tgtaataggt aaaaacttga tttttatgac 
5950
tataaaagta agttttggga aacaaattgg ggagagagta aggaaggact 
6000
atgaggtcat atcttctgtt ttgtgatcat ccatcctcca ttgttgttaa 
6050
tgtctgtgtc tctctttttc ttctcttctt tctcttactt tcctttctta 
6100
tctctagctc tctttctctc tcatgaatta tatcatatca tatatttgat 
6150
acaaacacat gtgatggtaa gtgagagtga ataaggtgaa actagctaga 
6200
tttttgagtt ttcatgaaat tttaacttat atgagtgata gaaaataatg 
6250
gaacttatac gtacatgtag gacaatttag atggttatct aagtttttgt 
6300
ttttgttttc tcttgagaat gttaaatgtt agtgttattt ttgtagtttt 
6350
ggaaaattat atatgagcta agattagttt agaagtggtc aaaagaaaca 
6400
tagatttgaa atttcaactg aattttcaag atttcaaata gtcaatgaaa 
6450
caaggaggta attaagacaa attagcttat ggggactctt ttttgttatt 
6500
ccttaaaatt actcttttta aaattaaaaa taactaatct catttcgaac 
6550
tacattactc aaactagtaa tctctaattc gacacgcaat ttccaaatac 
6600
ttattagtag agagtcccac gtgattactt tcttctccac caaaacataa 
6650
aacatgtcaa gattaaatgg tgtttgaaaa ttaaaagatc aattttctta 
6700
atcgtttaca gttgtcaact ctcatgtcct gaaatatata attctcatgt 
6750
ccaaaacaag aaaagctaac aacgacttca aattaaatca gtcaatcaaa 
6800
attagtcttc atttacctac taatttcttt ttatatatcc gatgggtact 
6850
ctacgaaatc agagtttcgt ttctttattt attttctttt ataagatttt 
6900
tgaggttttt tcagaggttg gaattgagcg caagattagg ttttgggtct 
6950
gtaagatttg ttgtctttgt taaagaatct ttgatcacgt catcactcag 
7000
atattatttc tttttatttt tcacttgtat ttttactaat ttattataaa 
7050
gttttgttag tttcagttct tgacttctga caagaaggtt ttatgtcata 
7100
atgaattaat ttgtaaccta tttataaatt caaaaatgtc atcatattac 
7150
tacttttgac catttaatat tagatttctc atttggtcaa tacccaatgt 
7200
tcatattaca tatatagaga caaaaattat aaggatacta aattgttcat 
7250
atttcttgga agtaaaaaga ttaatgatca ctgaataaat agatttggca 
7300
tagaagtata gcattggaat tgcttcaaca tctttggtgt agatagattt 
7350
atgcaatttc tctttctttt tgaagtatct tttttttttc tagagagaga 
7400
ataatgttag ggatttttat cattttctct ctcattatgg gtactgagag 
7450
gaaagtgaga tttttagtac ggatccaata gtttaagagt ttggtctgcc 
7500
ttctacgatc caaaaaaatc tacggtcatg atctctccat cgagaaggtt 
7550
gagagttcag acatcaaagt ctataatatg tcattgtaat acgtatttgt 
7600
gtatatatat ctatgtacaa gtacatatac aggaaactca agaaaaaaga 
7650
ataaatggta aatttaatta tattccaaat aaggaaagta tggaacgttg 
7700
tgatgttact cggacaagtc atttagttac atccatcacg tttaaattta 
7750
atccaatggt tacaatttta atactatcaa atgtctattg gatttatacc 
7800
caatgtgtta atgggttgtt gacacatgtc acatgtctga aaccctagac 
7850
atgttcagac caatcatgtc actctaattt tgccagcatg gcagttggca 
7900
gccaatcact agctcgataa atttaaggtt tcagaggaat tttaatttat 
7950
ttagggttca tattgtttca taaaatgatt ctttatttgt tacaacttta 
8000
aggaaatatt ttattaacta tttaattgtt cccttttctt atattacttt 
8050
tgttttttct tcacatcatg tgtcacatta agttgcattt cttctgactc 
8100
aaaagaaccg atgtttgctt ttaaggtttc gtattagaat cacttaactg 
8150
tgcaagtggt cgatttgacc ctatcaattt tattttttat tacttatcaa 
8200
aatgcagatt taagcgtaga ttaagtttag aaaataggta gttaataggt 
8250
ctaattaact tattaattcc tttaaaaaaa ttattgcagT GTAAAAGGGA 
8300
CTATTGAGAG GTACAAGAAG GCAATATCGG ACAATTCTAA CACCGGATCG 
8350
GTGGCAGAAA TTAATGCACA Ggtaagtggt aacttaatat tacacgaatg 
8400
attttaatta atatatgatg acatgacaac attgttcatt cttttactct 
8450
tttttttttt gttgttgttg tagTATTATC AACAAGAATC AGCCAAATTG 
8500
CGTCAACAAA TAATCAGCAT ACAAAACTCC AACAGgttaa ttatctaact 
8550
gacttgaaat atttgattac ttggttgtta ttaactattt gatatattaa 
8600
catatgttga taaatcaatt agGCAATTGA TGGGTGAGAC GATAGGGTCA 
8650
ATGTCTCCCA AAGAGCTCAG GAACTTGGAA GGCAGATTAG AGAGAAGTAT 
8700
TACCCGAATC CGATCCAAGA AGgtaattct atttttttta taaatgcttc 
8750
aatataatat caaattaaat ctatatgcct tgttgctaat ttttgtttaa 
8800
ttttacagAA TGAGCTCTTA TTTTCTGAAA TCGACTACAT GCAGAAAAGA 
8850
gtaagaaata aatcttaact taatttctat tcttaatatg ttcttataat 
8900
aattttgctc atttgcattg caccgattaa gcagGAAGTT GATTTGCATA 
8950
ACGATAACCA GATTCTTCGT GCAAAGgtaa aagtacacat tatatatcaa 
9000
tttctataat tttccctatt gtttcaataa atattatatg aaaacgatta 
9050
aaatggtgaa agtacttgta gataaatagt ttatgacata tatttgtgta 
9100
atgtagATAG CTGAAAATGA GAGGAACAAT CCGAGTATAA GTCTAATGCC 
9150
AGGAGGATCT AACTACGAGC AGCTTATGCC ACCACCTCAA ACGCAATCTC 
9200
AACCGTTTGA TTCACGGAAT TATTTCCAAG TCGCGGCATT GCAACCTAAC 
9250
AATCACCATT ACTCATCCGC GGGTCGCCAA GACCAAACCG CTCTCCAGTT 
9300
AGTgtaagga cacaaaatct tgctccgatc aatcattcta gtcttatatt 
9350
attaatcggt ccattttgta aaacttgaca gcatggattt ggtcttttat 
9400
gctgttttgt agGTAAtata ggctgaagga aatggccggg agtgaataaa 
9450
aaccagaatt gggttgagca agcaatataa agctaatgca tgttatatat 
9500
atatttatcc catgaatgtt gtatcagtga attttatgct tatgttgatg 
9550
tgaaattaat atcttaaaga catgtcatta atgtgcttaa tttgcttcaa 
9600
aacatctatg tgtataagtg tactattagt tcaattgttg tatttaatta 
9650
ccaattcctg ctctattaat gattttatta tagaaaagtc tcaatatgat 
9700
aatgatatat attcatgtgc tgagttccat cctcctcctc cttctcccca 
9750
tgtggtacag ttgcaaaatg tcgaaacatt cgttcatttt gtagctgcct 
9800
accaggaata cattcaccac ccggtctcaa tatctcgcgt cttgctcggt 
9850
gaaaacacat acaagagtat taaccatatt ttctttaaat gcacatacaa 
9900
tagcttatct ctgcctagct tcatttcgta aaccaagagc aaacattatc 
9950
ggatggctcc atacctgttc tcaataaatc atggtcataa tcaagctcat 
10000
tttcctagcc tccggttact agattttgta tggaacgcaa catccatttc 
10050
catccaggcc cggtccaaca attttttttg caagggacaa gatatagttg 
10100
ttattgttca agaacctgac tcttatgcac aagcttcctc ttatcagaat 
10150
tcgccattta aaccaacttc agtttctttt tatatccatt tactagaaaa 
10200
gtgtttgaac aattaaaaga ttgatacata gtaataacta ataagagaat 
10250
cagagatcca aatgaattta gtcatctata agaaagcaga aatttcatgt 
10300
cattatatag aaccatgata cataaactca acaaaacaaa caattcttct 
10350
gcagcaaaaa gaaacaatca tcaaacactt aaataagaaa aagattaaat 
10400
ctgtctccct ctctttttca ctctgtgttt gcttggagga aatttcatga 
10450
aCTAGAGCCG AGCAAGCTGC TGGATATCAT AAGGATGAGC ATCAGAAGCA 
10500
GATTCTCTCT GAAAAGATCG ACTACCGATG ACAACATTCG CAGCTTCTCC 
10550
TGGATGAAAC GCGTCCCAGA ACACATACTC GTCCCTGTTA AGACATGGAG 
10600
CTTGACCCGG AAGACAAGTT ATCTGTCCAT TGTTCCTCCC AACTCCACAA 
10650
CATCCCGCGT TTGTCACCCT AAACCctaaa ccattaacaa gacgttgatg 
10700
aaaccatcaa caaagttttc aggcaacatt tgatagagtt tgtttaagag 
10750
gtgactctta cCATAGCGAG AAGGATTAGC TACCATGTCT TGGAAGATAC 
10800
CATAAGCATT AATGTAAGTG AACTTGGCCC CTGGTGTGTT TTGGTTGAAG 
10850
TGATCAACCA GAGACACAAG CTTACTGTTG AAGATTCTGT TAGCGGAATT 
10900
GATCCTTTCG TCACAAGTCA CCCCGTCTCT GCTGTTTTGA GCCAGCTCAT 
10950
TTGGACTGCA TCCTATTGCA CCTATACCAA CTAGCGCAAA CTTCCTCGCT 
11000
CCGTTGTTAT ACATTATcta ctccatacaa aaatacaaag attcttatca 
11050
aacacagaga aaacagagta tatatgaaca gcggacagag gaaacagagt 
11100
ttaaagaaac agagaatatt agcaaataaa tgaacggacC CGGAGTTGCT 
11150
CGGTGTAGCG GTTTATGAGG TCGTTGGCGT AGG
11200