fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G19990 FRS1 FAR1-related sequence 1 (.1.2)

>AT4G19990.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BglII A|GATCT 1704
HindIII A|AGCTT 95, 326, 499, 766, 1631
HpaI GTT|AAC 1270
NdeI CA|TATG 886, 1736, 1870
PstI CTGCA|G 1414
StyI C|C[AT][AT]GG 1978
XbaI T|CTAGA 718
XhoI C|TCGAG 454


Click here to view TAIR data

>AT4G19990.1 length:2064
ATGTCGTCAG GAGAGTGTAG CAATGTGCAG TTAGATGATC ATAGGAAGAA 
50
TAACTTAGAG ATTGATGAAG GGAGAGAATT TGAATCAAAA GAGGAAGCTT 
100
TTGAGTTCTA CAAAGAATAT GCTAACTCTG TTGGTTTTAC TACCATTATT 
150
AAAGCTAGTC GTCGTTCAAG AATGACCGGG AAATTTATTG ATGCCAAGTT 
200
TGTTTGTACG CGATATGGAA GCAAGAAAGA AGACATAGAT ACTGGTTTAG 
250
GTACTGATGG ATTTAACATT CCTCAAGCAA GAAAACGTGG TAGAATTAAC 
300
CGGTCATCGT CGAAAACCGA TTGTAAAGCT TTTTTACATG TTAAGAGAAG 
350
GCAAGATGGG AGGTGGGTTG TTCGTAGTTT GGTAAAAGAA CATAACCATG 
400
AAATCTTCAC TGGTCAAGCT GATTCCTTAA GAGAATTGAG TGGGAGGAGA 
450
AAACTCGAGA AACTAAACGG TGCTATTGTT AAAGAGGTGA AAAGCAGGAA 
500
GCTTGAGGAT GGGGATGTTG AAAGACTTTT AAACTTCTTT ACTGATATGC 
550
AAGTTGAGAA TCCTTTCTTC TTTTATTCCA TTGATCTCAG TGAGGAGCAG 
600
AGTTTAAGAA ACATCTTTTG GGTTGATGCA AAAGCGATGC ACGGATGCAG 
650
ACCTAGAGTT ATACTTACTA AGCATGACCA AATGCTCAAG GAAGCTGTCT 
700
TGGAGGTGTT CCCATCTTCT AGACATTGCT TTTATATGTG GGATACTCTT 
750
GGCCAGATGC CGGAAAAGCT TGGTCATGTT ATCAGACTAG AGAAAAAACT 
800
TGTGGATGAG ATAAATGATG CTATTTACGG GTCTTGCCAG AGCGAGGACT 
850
TTGAAAAGAA TTGGTGGGAG GTAGTTGATA GGTTTCATAT GAGAGACAAC 
900
GTGTGGCTTC AGTCGTTGTA TGAAGATAGG GAATATTGGG TTCCTGTATA 
950
TATGAAAGAT GTATCTCTAG CGGGAATGTG TACAGCTCAG AGATCAGACA 
1000
GTGTGAACTC TGGTTTAGAT AAATACATTC AAAGGAAAAC TACATTTAAA 
1050
GCATTTCTTG AGCAGTACAA GAAGATGATA CAAGAGAGGT ACGAAGAGGA 
1100
AGAGAAATCG GAGATTGAGA CATTGTATAA ACAACCGGGA CTTAAGTCAC 
1150
CTTCACCATT TGGGAAGCAA ATGGCTGAGG TATACACTCG TGAGATGTTC 
1200
AAGAAGTTTC AGGTGGAGGT GTTGGGAGGA GTTGCTTGTC ATCCGAAGAA 
1250
AGAAAGTGAA GAAGATGGGG TTAACAAGAG GACTTTCAGG GTTCAAGATT 
1300
ATGAACAGAA CCGTTCTTTC GTTGTGGTCT GGAACTCTGA ATCATCTGAA 
1350
GTTGTCTGTT CTTGTCGATT GTTTGAGTTG AAAGGTTTTC TTTGTAGGCA 
1400
CGCGATGATT GTTCTGCAGA TGTCAGGGGA ACTTAGTATT CCTTCTCAGT 
1450
ATGTGTTGAA GCGTTGGACA AAGGATGCAA AAAGCAGAGA AGTCATGGAA 
1500
TCTGATCAGA CTGATGTAGA ATCAACTAAG GCTCAACGGT ACAAGGATCT 
1550
TTGTCTCCGT TCTTTAAAAC TGAGTGAGGA AGCATCTTTA TCCGAGGAGA 
1600
GCTATAACGC CGTGGTCAAT GTGCTGAATG AAGCTTTAAG AAAGTGGGAG 
1650
AACAAGAGTA ACTTGATCCA AAATCTTGAA GAGTCAGAAT CGGTTACAGC 
1700
TCAAGATCTT CCAATACATG AAGAACAGAA CAATACATAT GACATGAACA 
1750
AAGACGATAA TGTCGCTGAC ACAGGACAGG AATATTCATT GCAAGAAGTC 
1800
TGGAAAGTAA CTGCTTTGCA AGAACAAAGA AACCGATACT CGATTCTCGA 
1850
TGACTACCTC AGTGCCCAAC ATATGTCTCA TGAAATGGGA CAAATCAACT 
1900
CGATGGCCTC AAATCGCAAT GGATATTGTT CTGTCCATCA AAACATACAC 
1950
TCATTGCAGG GGCAATCCAT AACTCACCCA AGGCTTTATG AAACTGAACA 
2000
ATCAAGTTTC AGACCAGAAG CTATGTATGA AAGACTACAA GATATGGTAA 
2050
AAGACTTGAA CTAG
2100

>AT4G19990.1 longest ORF length:687
MSSGECSNVQ LDDHRKNNLE IDEGREFESK EEAFEFYKEY ANSVGFTTII 
50
KASRRSRMTG KFIDAKFVCT RYGSKKEDID TGLGTDGFNI PQARKRGRIN 
100
RSSSKTDCKA FLHVKRRQDG RWVVRSLVKE HNHEIFTGQA DSLRELSGRR 
150
KLEKLNGAIV KEVKSRKLED GDVERLLNFF TDMQVENPFF FYSIDLSEEQ 
200
SLRNIFWVDA KAMHGCRPRV ILTKHDQMLK EAVLEVFPSS RHCFYMWDTL 
250
GQMPEKLGHV IRLEKKLVDE INDAIYGSCQ SEDFEKNWWE VVDRFHMRDN 
300
VWLQSLYEDR EYWVPVYMKD VSLAGMCTAQ RSDSVNSGLD KYIQRKTTFK 
350
AFLEQYKKMI QERYEEEEKS EIETLYKQPG LKSPSPFGKQ MAEVYTREMF 
400
KKFQVEVLGG VACHPKKESE EDGVNKRTFR VQDYEQNRSF VVVWNSESSE 
450
VVCSCRLFEL KGFLCRHAMI VLQMSGELSI PSQYVLKRWT KDAKSREVME 
500
SDQTDVESTK AQRYKDLCLR SLKLSEEASL SEESYNAVVN VLNEALRKWE 
550
NKSNLIQNLE ESESVTAQDL PIHEEQNNTY DMNKDDNVAD TGQEYSLQEV 
600
WKVTALQEQR NRYSILDDYL SAQHMSHEMG QINSMASNRN GYCSVHQNIH 
650
SLQGQSITHP RLYETEQSSF RPEAMYERLQ DMVKDLN
700