fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G20970 bHLH162 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G20970.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 34
EcoRI G|AATTC 258
HindIII A|AGCTT 372


Click here to view TAIR data

>AT4G20970.1 length:573
ATGGAGCCGA GCCATTCAAA CACAGGTCAA TCAAGATCTG TAGATCGCAA 
50
AACGGTTGAG AAAAATAGAA GGATGCAAAT GAAGTCTCTC TACTCAGAAC 
100
TCATCTCTCT TCTTCCTCAT CATTCTTCTA CGGAGCCTTT AACACTACCT 
150
GATCAGCTAG ATGAAGCTGC AAACTACATC AAGAAGCTAC AAGTGAACGT 
200
GGAGAAAAAG AGAGAAAGGA AAAGGAACCT CGTTGCGACT ACAACTTTGG 
250
AGAAACTGAA TTCCGTCGGA TCTTCATCGG TTTCGTCGAG CGTCGATGTC 
300
TCCGTGCCAA GAAAGCTGCC AAAAATCGAG ATTCAAGAAA CTGGTTCCAT 
350
TTTTCACATC TTTCTTGTGA CAAGCTTGGA ACACAAGTTT ATGTTTTGTG 
400
AGATCATTCG TGTTCTCACC GAGGAATTAG GAGCTGAGAT CACTCATGCT 
450
GGATACTCCA TTGTTGATGA TGCTGTCTTC CACACCCTTC ACTGCAAGGT 
500
GGAAGAACAC GATTATGGAG CTAGGAGTCA AATTCCTGAA AGACTGGAGA 
550
AGATTGTGAA CAGTGTTCAC TAA
600

>AT4G20970.1 longest ORF length:190
MEPSHSNTGQ SRSVDRKTVE KNRRMQMKSL YSELISLLPH HSSTEPLTLP 
50
DQLDEAANYI KKLQVNVEKK RERKRNLVAT TTLEKLNSVG SSSVSSSVDV 
100
SVPRKLPKIE IQETGSIFHI FLVTSLEHKF MFCEIIRVLT EELGAEITHA 
150
GYSIVDDAVF HTLHCKVEEH DYGARSQIPE RLEKIVNSVH 
200