fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G21030 AtDof4,2, ATDOF4;2 Dof-type zinc finger domain-containing protein (.1)

>AT4G21030.1 CDS map

>>Show genomic map




Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstF5I, BstNI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HincII, HindIII, HpaI, HpaII, HphI, Hpy99I, HpyCH4III, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MspA1I, MspI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, Tth111I, XbaI, XhoI, XmaI
Name Recognition sequence Cut positions
AccII(FnuDII) CG|CG 57, 129
AciI C|CGC 56, 128
AluI AG|CT 98
AlwNI CAGNNN|CTG 197
ApoI Pu|AATTPy 301, 399
BsaJI C|CNNGG 70
BslI CCNNNNN|NNGG 198
BsrI ACTGGN| 199
BstBI TT|CGAA 413
BstEII G|GTNACC 500
BstUI CG|CG 57, 129
BstXI CCANNNNN|NTGG 522
BstYI Pu|GATCPy 269
DdeI C|TNAG 265, 434
DpnI GA-CH3|TC 83, 233, 256, 268, 428
DpnII |GATC 83, 233, 256, 268, 428
HhaI GCG|C 130
HinP1I G|CGC 130
HinfI G|ANTC 94, 164, 450, 576
Hpy188I TCN|GA 81, 224, 339
HpyCH4V TG|CA 140, 561
MboI |GATC 83, 233, 256, 268, 428
MfeI C|AATTG 521
MseI T|TAA 179
MslI CAPyNN|NNPuTG 368, 548
MwoI GCNNNNN|NNGC 56, 139
NlaIII CATG| 167, 386
NlaIV GGN|NCC 359, 481
PflMI CCANNNN|NTGG 198
Sau3AI |GATC 83, 233, 256, 268, 428
StyI C|C[AT][AT]GG 70
Taqƒ¿I T|CGA 366, 412
TfiI G|A[AT]TC 94, 450, 576
Tsp45I |GT[CG]AC 195
Tsp509I |AATT 5, 146, 300, 398, 409, 520, 564
TspRI NNCA[CG]TGNN| 199
XcmI CCANNNNN|NNNNTGG 525
XmnI GAANN|NNTTC 364, 455


Click here to view TAIR data

>AT4G21030.1 length:585
ATGAATAATT TGAATGTTTT TACAAATGAA GACAATGAAA TGAATGTGAT 
50
GCCCCCACCG CGAGTGTGTC CAAGGTGTTA TTCCGATCAA ACCAGATTCA 
100
GCTACTTCAA CAACAACAAG AAGTCTCAAC CGCGCTACAA ATGCAAGAAT 
150
TGTTGTAGAT GTTGGACTCA TGGTGGAGTT TTAAGGAACA TACCAGTCAC 
200
TGGAATATGT GATAAATCCA ATCTTCCGAA GATAGATCAA TCTTCGGTTT 
250
CTCAAATGAT CTTGGCTGAG ATCCAACAAG GCAATCATCA ACCTTTCAAA 
300
AAATTTCAAG AAAACATTTC AGTTAGTGTT TCTTCTTCTT CAGATGTTTC 
350
TATTGTTGGG AACCATTTCG ATGATTTGAG TGAACTTCAT GGTATAACAA 
400
ATTCTACTCC AATTCGAAGT TTTACAATGG ATCGCTTAGA TTTTGGTGAA 
450
GAATCGTTTC AACAAGATTT ATACGATGTT GGTTCCAATG ATTTGATTGG 
500
TAACCCTTTG ATAAACCAAT CAATTGGTGG ATATGTTGAT AATCACAAAG 
550
ATGAACACAA GTTGCAATTT GAATATGAAT CATAA
600

>AT4G21030.1 longest ORF length:194
MNNLNVFTNE DNEMNVMPPP RVCPRCYSDQ TRFSYFNNNK KSQPRYKCKN 
50
CCRCWTHGGV LRNIPVTGIC DKSNLPKIDQ SSVSQMILAE IQQGNHQPFK 
100
KFQENISVSV SSSSDVSIVG NHFDDLSELH GITNSTPIRS FTMDRLDFGE 
150
ESFQQDLYDV GSNDLIGNPL INQSIGGYVD NHKDEHKLQF EYES
200