fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G21030 AtDof4,2, ATDOF4;2 Dof-type zinc finger domain-containing protein (.1)

>AT4G21030.1 genomic map

>>Show CDS map




Uncut enzymes: Acc65I, AfeI, AflII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvrII, BaeI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BlpI, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, Bsu36I, BtrI, BtsI, Cfr10I, DraIII, EagI, EarI, EciI, EcoNI, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MlyI, MnlI, N.BstNBI, NaeI, , NarI, NcoI, NgoMIV, NheI, NotI, NruI, PI-PspI, PI-SceI(VDE), PflFI, PleI, PmeI, PshAI, PspOMI, PvuII, SacI, SacII, SapI, SbfI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, StuI, Tth111I, XmaI
Name Recognition sequence Cut positions
AatII GACGT|C 364
AccI GT|[AC][TG]AC 2321, 3052, 5204
AccII(FnuDII) CG|CG 3565, 3956, 4056, 4128, 5032
AccIII(BspMII) T|CCGGA 3365, 3375
AciI C|CGC 872, 3400, 3491, 3507, 3516, 4055, 4127
AclI AA|CGTT 1115, 3803
AflIII A|CPuPyGT 659, 677, 1265, 2072, 3605, 5033
AluI AG|CT 112, 700, 912, 1206, 1361, 1448, 1679, 1766, 1808, 1850, 1889, 2402, 2493, 3018, 3737, 3791, 4097, 5882, 5921
AlwNI CAGNNN|CTG 4196
ApoI Pu|AATTPy 380, 2329, 2711, 3278, 3441, 3748, 4300, 4398, 4634, 4819, 4896, 5250, 5277, 5624, 5687, 5728, 6063
AseI AT|TAAT 738, 2137, 2247, 2796, 3130, 3670, 5369
AvaI C|PyCGPuG 1348, 3990
AvaII G|G[AT]CC 1143, 1223, 3372, 3408, 3419, 4771, 5489
BalI TGG|CCA 5997
BclI T|GATCA 82, 148, 1056, 2067
BfaI C|TAG 214, 275, 471, 877, 1204, 1208, 1286, 1329, 1339, 2268, 2969, 3016, 3698, 4591, 5199, 5676, 5953
BglI GCCNNNN|NGGC 1414
BglII A|GATCT 3823, 3937, 5984
BsaAI PyAC|GTPu 517, 660, 678, 3594
BsaBI GATNN|NNATC 786
BsaHI GPu|CGPyC 364
BsaJI C|CNNGG 481, 902, 1791, 4069
BsaWI [AT]|CCGG[AT] 1226, 1394, 3365, 3375
BsiEI CGPuPy|CG 2175
BsiHKAI G[AT]GC[AT]|C 3572
BslI CCNNNNN|NNGG 985, 4197, 5389
BsoBI C|PyCGPuG 1348, 3990
Bsp1286I G[GAT]GC[CAT]|C 3572
BspDI AT|CGAT 1161
BspEI T|CCGGA 3365, 3375
BsrI ACTGGN| 4198
BssKI |CCNGG 902, 939, 1146
BstBI TT|CGAA 822, 2199, 3273, 4412, 5245
BstEII G|GTNACC 4499
BstF5I GGATGNN| 1874
BstNI CC|[AT]GG 902, 1146
BstUI CG|CG 3565, 3956, 4056, 4128, 5032
BstXI CCANNNNN|NTGG 4521
BstYI Pu|GATCPy 212, 718, 781, 1324, 3823, 3937, 4268, 5984
BstZ17I GTA|TAC 2321, 3052
BtgI C|CPuPyGG 481
Cac8I GCN|NGC 699, 1442, 1480, 2496, 5885
ClaI AT|CGAT 1161
DdeI C|TNAG 257, 690, 1550, 1724, 1769, 2119, 2256, 2349, 2716, 2963, 3537, 3776, 3789, 4264, 4433, 4615, 5183, 5618
DpnI GA-CH3|TC 81, 99, 147, 211, 253, 297, 717, 780, 1055, 1323, 1369, 1914, 1941, 2066, 2162, 2174, 2510, 3325, 3822, 3919, 3936, 4082, 4232, 4255, 4267, 4427, 4627, 4838, 5930, 5983
DpnII |GATC 81, 99, 147, 211, 253, 297, 717, 780, 1055, 1323, 1369, 1914, 1941, 2066, 2162, 2174, 2510, 3325, 3822, 3919, 3936, 4082, 4232, 4255, 4267, 4427, 4627, 4838, 5930, 5983
DraI TTT|AAA 2053, 2777, 4822, 4852, 5253
DrdI GACNNNN|NNGTC 2850, 3513
EaeI Py|GGCCPu 853, 5997
EcoO109I PuG|GNCCPy 1862, 4772
EcoRI G|AATTC 380, 4634
EcoRV GAT|ATC 1158
Fnu4HI GC|NGC 727, 851, 929, 1414, 1450, 1603, 1831, 3020, 3403, 3451, 3519
HaeIII GG|CC 179, 477, 852, 1861, 5996
HhaI GCG|C 3564, 4129
HinP1I G|CGC 3564, 4129
HincII GTPy|PuAC 504, 549, 1261, 2429, 3183, 3320, 5204, 5290, 5527
HindIII A|AGCTT 3792, 5922
HinfI G|ANTC 22, 68, 184, 796, 906, 1073, 1345, 1357, 2144, 2389, 2472, 2843, 4093, 4163, 4449, 4575, 5060, 5067, 5173, 5594, 6043
HpaI GTT|AAC 549, 1261, 3183
HpaII C|CGG 916, 939, 1225, 1393, 3364, 3374
Hpy188I TCN|GA 19, 65, 138, 251, 401, 683, 1999, 2280, 2615, 2668, 2740, 3328, 3727, 3828, 4080, 4223, 4338, 4630, 4637, 5070, 5382, 5399, 5465, 5970, 5986
Hpy99I CG[AT]CG| 330, 362, 2159, 5177
HpyCH4III ACN|GT 545, 633, 1141, 1753, 1798, 1840, 2082, 2425, 2434, 3055, 3077, 3316, 3421, 5459, 5600, 6004
HpyCH4IV A|CGT 363, 431, 516, 659, 665, 677, 732, 1093, 1114, 2060, 3593, 3599, 3802
HpyCH4V TG|CA 237, 270, 728, 857, 1173, 1451, 1535, 1667, 1688, 2092, 2591, 2630, 3106, 3160, 3449, 4139, 4560, 4794, 4891, 5003, 5828, 6050
MboI |GATC 81, 99, 147, 211, 253, 297, 717, 780, 1055, 1323, 1369, 1914, 1941, 2066, 2162, 2174, 2510, 3325, 3822, 3919, 3936, 4082, 4232, 4255, 4267, 4427, 4627, 4838, 5930, 5983
MfeI C|AATTG 792, 4520
MluI A|CGCGT 5033
MscI TGG|CCA 5997
MseI T|TAA 405, 548, 590, 737, 808, 1120, 1132, 1152, 1260, 1280, 1744, 1969, 2052, 2136, 2213, 2246, 2260, 2290, 2364, 2694, 2698, 2776, 2789, 2795, 2811, 3129, 3182, 3280, 3665, 3669, 3676, 3719, 3732, 3769, 3837, 3864, 3947, 3972, 4178, 4671, 4697, 4702, 4744, 4787, 4821, 4851, 5085, 5252, 5364, 5368, 5455, 5480, 5561, 5579, 5629, 5644, 5720, 5734, 5748, 5770, 5846
MslI CAPyNN|NNPuTG 2075, 2415, 2638, 4367, 4547, 4618, 5809
MspA1I C[AC]G|C[GT]G 1605, 3402, 3453, 3518
MspI C|CGG 916, 939, 1225, 1393, 3364, 3374
MwoI GCNNNNN|NNGC 708, 926, 1360, 1414, 1447, 1459, 1534, 1600, 1612, 1687, 1882, 3516, 4055, 4138
NciI CC|[CG]GG 939
NdeI CA|TATG 1009, 1991
NlaIII CATG| 150, 855, 1046, 1058, 1264, 1686, 2071, 2449, 2589, 3604, 3639, 4166, 4385, 6031
NlaIV GGN|NCC 2575, 4358, 4480, 4771, 5380
NsiI ATGCA|T 2093
NspI PuCATG|Py 1265, 1687, 2072, 3605
PacI TTAAT|TAA 2698, 3669, 5368
PaeR7I C|TCGAG 1348, 3990
PciI A|CATGT 1265, 2072, 3605
PflMI CCANNNN|NTGG 4197
PmlI CAC|GTG 517, 660, 678, 3594
PpuMI PuG|G[AT]CCPy 4772
PsiI TTA|TAA 3119, 3142, 3942, 4937, 5227, 5281
PspGI |CC[AT]GG 902, 1146
PstI CTGCA|G 238, 1452, 3450
PvuI CGAT|CG 2175
RsaI GT|AC 663, 1179, 1293, 1819, 2238, 3467, 3601, 5320
RsrII CG|G[AT]CCG 3420
SalI G|TCGAC 5204
Sau3AI |GATC 81, 99, 147, 211, 253, 297, 717, 780, 1055, 1323, 1369, 1914, 1941, 2066, 2162, 2174, 2510, 3325, 3822, 3919, 3936, 4082, 4232, 4255, 4267, 4427, 4627, 4838, 5930, 5983
Sau96I G|GNCC 477, 1143, 1223, 1861, 3372, 3408, 3419, 4771, 5489
ScaI AGT|ACT 1180, 1820
ScrFI CC|NGG 902, 939, 1146
SfcI C|TPuPyAG 238, 1452, 3450, 3627
SmlI C|TPyPuAG 1348, 2839, 3990, 4952
SspI AAT|ATT 467, 2596, 2793, 5009, 5220, 5517, 5738, 5798
StyI C|C[AT][AT]GG 1791, 4069
SwaI ATTT|AAAT 5254
Taqƒ¿I T|CGA 289, 299, 328, 360, 653, 753, 821, 1160, 1347, 1371, 1682, 2160, 2172, 2176, 2198, 2474, 3266, 3272, 3989, 4365, 4411, 5064, 5175, 5203, 5244, 5879, 5947
TfiI G|A[AT]TC 22, 68, 184, 796, 906, 1073, 1357, 2144, 2389, 4093, 4449, 4575, 5060, 5067, 5173, 5594, 6043
TliI C|TCGAG 1348, 3990
TseI G|C[AT]GC 727, 929, 1450, 1603, 1831, 3020, 3403, 3451, 3519
Tsp45I |GT[CG]AC 989, 1084, 1843, 2079, 4194, 5342
Tsp509I |AATT 132, 193, 379, 534, 612, 791, 806, 1029, 2134, 2168, 2215, 2244, 2262, 2292, 2328, 2384, 2650, 2682, 2696, 2710, 2730, 2771, 2797, 3094, 3131, 3221, 3248, 3277, 3355, 3440, 3500, 3667, 3671, 3678, 3690, 3721, 3747, 3767, 3945, 3970, 4004, 4145, 4299, 4397, 4408, 4519, 4563, 4633, 4667, 4673, 4807, 4818, 4861, 4895, 4969, 5109, 5210, 5249, 5268, 5276, 5308, 5330, 5366, 5370, 5411, 5436, 5478, 5493, 5559, 5564, 5623, 5686, 5727, 5754, 5848, 6062
TspRI NNCA[CG]TGNN| 237, 1847, 2085, 4198, 4615, 5603
XbaI T|CTAGA 1330, 5677
XcmI CCANNNNN|NNNNTGG 3481, 4524
XhoI C|TCGAG 1348, 3990
XmnI GAANN|NNTTC 829, 2725, 4363, 4454


Click here to view TAIR data

>AT4G21030 genomic sequence (4000-4584,) length:6084
atagacaaga aaaatctcat ctgaatccaa accccaatga agtgatatga 
50
tttgtataaa cgaaatcgga atcaaatctt ttgatcaata gaaaaaaaac 
100
gatcccactt caaagctcat acacgacatc atcaattttc agaagattga 
150
tcatgggaca caaaatagag taatagaaaa ggccgattcc tcaaaattag 
200
ggtttccaga cggatctagg gtttcgcaac ctaaacactg cagtagattt 
250
ctccgatctt agaacgaaga ctgcaactag ggtttatcaa tcgacaaaga 
300
tcgaagaaca cactttattt cttactctat cgacgagagg atatgggtgt 
350
ggtttagggt ttcgacgtcg ggaactgatg aattcttctt tgcccagacc 
400
ttcggattaa agatgaatat aaataaaact gaacgtaaaa gaaaacttgt 
450
cctacaagaa gaaagaaata ttctagtggg ccgtggaagt cggttggatt 
500
gaggttgact aaaaaccacg tggcttgaaa catacaattt cattcacggt 
550
taactttgtc tttttccgta gtggttatta cataacctac attaaaccga 
600
tgcgtttcgt atcaattcac cgaagaaatc aaaactgtta gagcaactcc 
650
aatgtcgaac acgtgtacgt tcacccacac gtgtcagata cttaggttgc 
700
cagcttatct tgctgttgga tctatatgct gcaacgtatt aatataaacc 
750
gacctcgaaa ataaaagaga gaagagaaaa ggatctcaat ccaattgaat 
800
catagcaaat taagtttcgc attcgaagtt tttcttgatt tgataaaaAT 
850
GGCGGCCATG CAACTAACAA GAACCGCTCT AGTTGGTCTC TCAAAGGCTT 
900
TCCCTGGAAT CAAAGCTCCG GCTACTCTCG CTGCTTCTTC CCGGAAAGTC 
950
TCTCGCATCT GCTTCGCCAC CTCCGTTAGC CAAAACGAGg tcacgatttt 
1000
tagatattca tatgattata gaacaagagt aattttgttt tagttctcat 
1050
gtatttgatc atgtgagagt tttgattcaa gtaagtcaca taagacgtaa 
1100
acaaagtagc aaataacgtt tttaatgtcc attttaacga gacggtcctg 
1150
gatttaagat atcgatacat tttttgcata gtactcgtag cggttgtggt 
1200
gtatcctagc tagacaagat tttggtccgg tttattgaga tatatgtagg 
1250
tgttcctttg gttaacatgt tggtcaaact attaacccta gtttgtacct 
1300
tgttatgttt attttcagGG AAGAGATCCT CTAGATAACG CTAGAGACTC 
1350
GAGGGCTGAT TCAGCTTACG GATCGAAGAA ATGGAGGGAG GACACCGGAG 
1400
AATACTATGC CCAAGCGGCT AAAGACAAGG CTAACGAAGG AGCAAGCAAA 
1450
GCTGCAGATA AAGCCTACGA GACAAAAGAG CAAGCAAAGG ATAAAGCCTA 
1500
CGAAACTAAA GAGAAAGCAA AGGATACAGC CTACAATGCA AAAGAGAAGG 
1550
CTAAGGATTA TGCTGAACGG ACTAAAGATA AGGTGAACGA AGGGGCGTAT 
1600
AAGGCAGCGG ATAAAGCGGA AGATACAAAA GAAAAAGCAA AGGATTACGC 
1650
AGAGGATACA ATGGACAATG CAAAAGAGAA AGCTCGACAT GCAAAAGAGA 
1700
AGGTGAAAGA GTATGGAGAA GATACTAAGG AGAAGGCAGA AGGGTTTAAG 
1750
GAGACTGTGA AAGGTAAAGC TGAGGAACTT GGAGAGAAGA CCAAGGAGAC 
1800
GGTGAAAGGA GCTTGGGAGA GTACTAAAAA CGCTGCCCAA ACCGTCACTG 
1850
AAGCTGTGGT AGGGCCTGAA GAGGATGCGG AGAAGGCACG AGCTGATATG 
1900
AATAAAGGCG TGGAAGATCA CAGGAAGAAA AAAGCAGAGA AAGATCAAAA 
1950
AGAGGACGAT TTCATAACAT TTAACTGAtg aggaaagata catatgcgtt 
2000
ctgaagtgtt attgcttttt atgtattgct ctgtttcctg tttattctct 
2050
gttttaaaac tacgtttgat cacatgtatg tgacagtgtg agatgcatta 
2100
gtatataaat aaggtaaatc taaggttatt tctaaaatta atatgattct 
2150
atttcttttc gtcgatctca atttcgatcg agcattgaag atttgatgtt 
2200
cgaaggtcat aaagttaatt tgagtagtgt tttgttcagg tacacaatta 
2250
atgtccctaa gttaattatc taggttgttt tctgattttt tttaattgtt 
2300
attcattcta taaacttctt gtatacttga atttgttatc attgtgatac 
2350
tgaggcattt cttatttaac cattctgttc tcacaaattg aatccatcaa 
2400
cacagctttc cattgccgtg tgcttactgt caacacggtt tttctgttgc 
2450
catgtccttt tgttgtttca aagactcgat tttgaagatt ttatagcttg 
2500
cgtgattgat agatcaggag ggttttctct ttgctatgtc tattctcatc 
2550
tgtctttgtt gaggtttttc tttcggctcc aatgtatttt catgcaatat 
2600
tgtgtggttt tcacctctga atagatgttt ttgcacaaga atgtcttttg 
2650
taattttctg tatcaatatc agatggcaaa aaaaattgta taatcttaat 
2700
taaatgtgga aaatttctaa gaaagatttc taattttttt tctgatacgc 
2750
caataaaaca tcctcattag acaattttta aaagatgtct ttaatattaa 
2800
ttagtaataa agttaaaaga cattcttctt ttttgtgtct caagactcaa 
2850
atgtcttttc aaacacacaa atctaaaact aaagacaccc attattttat 
2900
ttttttattg gtattagttt tatatttaga gacactcaca aataaatgac 
2950
caatgtgtgt tctctaagaa ctaggtgtga atgtctcaca tacatatttt 
3000
tttctcaaaa caaatctcta gctgcttgtt gtcttgattt tgggtattgt 
3050
tgtatactgt aatctattat atcttcaaca gttgtatcca acagaaattg 
3100
tatccaatgc aaataagttt ataagaaaca ttaattttgt tttataataa 
3150
gttgtttata ttgcaccaat gagagcgtat gggttaactc tactctcaca 
3200
cacatttttt tttcttctca aaaattacta taaaatctca aataaaggta 
3250
attatttagg aactttgtcg atttcgaaaa tttaaggttt gaatggttat 
3300
ggctggggcg aacaaaaccg tcaacggatc agaccgattt ttatttatca 
3350
ttcatcaatt atactccgga atggtccgga ctaaaaaaaa atagaagaaa 
3400
accgctgcgg accatctgcg gaccgttttt acatacaaat aaatttggtc 
3450
tgcagcggtt tattgtccgt accaaaaatg agatggacta aaccgcagac 
3500
aaattagacc gctttgtccg ctgcctccat tcatagtctt aggttatgtt 
3550
tctaatcatt agatagcgcg tgagcacaca tatattcata cagcacgtga 
3600
acgtacatgt tttcacatac tatctcctat agtaaatatc catgtcatat 
3650
atttatatag ttggacttaa ttaattgtta attacattct caattttcac 
3700
tagatttctt tcctgtttat ttaattttct gatttaatag cttatcaaaa 
3750
ttttcacata ctgacaagaa ttaaccctta gtttttttac taagcttacc 
3800
ctaacgttta tggtgtgtag atagatcttc agattttatt aaacactatc 
3850
tttgactaac tctccttaaa tgttcacgcc ccaagaacct atataagaat 
3900
acactttcca caacagaaaa gatcatagta acaagaagat cttataaatt 
3950
aagtcttcgc gtttttggag aaattaaaat aaacaacctc tcgagagaaA 
4000
TGAATAATTT GAATGTTTTT ACAAATGAAG ACAATGAAAT GAATGTGATG 
4050
CCCCCACCGC GAGTGTGTCC AAGGTGTTAT TCCGATCAAA CCAGATTCAG 
4100
CTACTTCAAC AACAACAAGA AGTCTCAACC GCGCTACAAA TGCAAGAATT 
4150
GTTGTAGATG TTGGACTCAT GGTGGAGTTT TAAGGAACAT ACCAGTCACT 
4200
GGAATATGTG ATAAATCCAA TCTTCCGAAG ATAGATCAAT CTTCGGTTTC 
4250
TCAAATGATC TTGGCTGAGA TCCAACAAGG CAATCATCAA CCTTTCAAAA 
4300
AATTTCAAGA AAACATTTCA GTTAGTGTTT CTTCTTCTTC AGATGTTTCT 
4350
ATTGTTGGGA ACCATTTCGA TGATTTGAGT GAACTTCATG GTATAACAAA 
4400
TTCTACTCCA ATTCGAAGTT TTACAATGGA TCGCTTAGAT TTTGGTGAAG 
4450
AATCGTTTCA ACAAGATTTA TACGATGTTG GTTCCAATGA TTTGATTGGT 
4500
AACCCTTTGA TAAACCAATC AATTGGTGGA TATGTTGATA ATCACAAAGA 
4550
TGAACACAAG TTGCAATTTG AATATGAATC ATAAaaccaa cgctagtgga 
4600
agggattttt aggcactgag atgaacaaga tcagaattca gaaacaactc 
4650
tttgtttagg tcttctacaa ttttaattgt attacttgtt ttctatcttt 
4700
aagttaatgt ttttgtcctt gttcgtttat gcttcctatt tgcttttaag 
4750
ttttgtttat gatttatgtt gggtcctttt ttagttattt aagtttgcaa 
4800
cttttttcaa ttccctaaaa atttaaacat aagttgtttg atcttctttc 
4850
ttttaaatat ataattatac aagcgttact atttctttat attgcaaatt 
4900
ctactctcta ttatttgcta atagtatttt tccttgttat aagtatcttg 
4950
acttgagcaa accacacact aattttttag aatatctaaa tatcttatat 
5000
aagatgcaaa tatttagata agcgaaaaaa atacgcgtcc aatatataga 
5050
aatcaatatg gaatctcgaa tcggactaca caaaagttaa acttgtgagt 
5100
gccacttgat aatttcttga aaactatata atgtaacaaa tatatttttc 
5150
tataagtttc ggttttgttc tatgaatcga cgactgagtg ggtttctatt 
5200
ctagtcgacc caattattca atattattat aatgctattc attattcgaa 
5250
aatttaaata tacttgtata attgttgaat ttataaatag ttgacgggaa 
5300
aaagtaagaa attgtaaata agtacatata taattagcaa aagtgactat 
5350
caatataagg ctgtgttaat taatttgttg gttccgatta taggaaatgt 
5400
ctgaaacttc taaattatat aataataaaa tatgtgtaat tattcctata 
5450
aactatttaa ctgtatctga aatgttcaaa attaaatatg gaccaatttt 
5500
acaaaagatg tcctaaaata ttagtagtca actaatataa taaagtagat 
5550
atgtaaataa aattaaattg agattttcta ttaaatatat gacagaatca 
5600
acagtgatat atgtaatact tagaaattca ttaaaatata tttttttaat 
5650
ataacattta tagtctttca cgaatatcta gatttcaaat tttatttgat 
5700
tgttgaaaaa tgtgttcgtt gttaaataaa tttatttaat attaggtgat 
5750
taactaatta tgaatatatg gttaagaaac gaataaaaac atagatgaat 
5800
atttcatcta aatggttcat cctccattat gcagaaacca aaacttttta 
5850
attgactaaa gttttacatt atggtagatt tcgagcttgc ttacaaatgc 
5900
ctgtttcttc taatgataaa gaagcttcaa cgatcatagt atttagtgtc 
5950
gagcctagta agaagaaaac tctgaaccaa agaagatctg atgctgtggc 
6000
caaaactgtt agagccagag gttcaagcag ttcatgggtt ttggattcta 
6050
ttgcaggttg ccaaatttta gacttgatat aaaa
6100