Locus |
Common name |
Short description |
AT4G21050 |
AtDof4,4 |
Dof-type zinc finger domain-containing protein (.1) |
>AT4G21050.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssKI, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HincII, HpaI, HpaII, HphI, Hpy99I, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MspA1I, MspI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, Tth111I, XbaI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
138 |
AciI
| C|CGC |
137 |
AluI
| AG|CT |
184, 600 |
ApoI
| Pu|AATTPy |
420 |
AseI
| AT|TAAT |
289 |
BamHI
| G|GATCC |
505 |
BsaJI
| C|CNNGG |
79 |
BslI
| CCNNNNN|NNGG |
207, 550 |
BstBI
| TT|CGAA |
443 |
BstUI
| CG|CG |
138 |
BstYI
| Pu|GATCPy |
505 |
DdeI
| C|TNAG |
100, 259, 396, 458 |
DpnI
| GA-CH3|TC |
242, 336, 504 |
DpnII
| |GATC |
242, 336, 504 |
HhaI
| GCG|C |
139 |
HinP1I
| G|CGC |
139 |
HindIII
| A|AGCTT |
601 |
HinfI
| G|ANTC |
87, 129, 173, 474, 624 |
Hpy188I
| TCN|GA |
90, 233, 258, 304, 377 |
HpyCH4III
| ACN|GT |
124, 157, 363 |
HpyCH4V
| TG|CA |
149, 578 |
MboI
| |GATC |
242, 336, 504 |
MseI
| T|TAA |
188, 288 |
MslI
| CAPyNN|NNPuTG |
72 |
MwoI
| GCNNNNN|NNGC |
148 |
NlaIII
| CATG| |
176, 407, 620 |
NlaIV
| GGN|NCC |
505, 594 |
PflMI
| CCANNNN|NTGG |
207 |
Sau3AI
| |GATC |
242, 336, 504 |
SfcI
| C|TPuPyAG |
123 |
SmlI
| C|TPyPuAG |
314 |
StyI
| C|C[AT][AT]GG |
79 |
Taqƒ¿I
| T|CGA |
251, 334, 442 |
TfiI
| G|A[AT]TC |
87, 129, 474, 624 |
Tsp45I
| |GT[CG]AC |
65 |
Tsp509I
| |AATT |
286, 419, 430 |
TspRI
| NNCA[CG]TGNN| |
127 |
XcmI
| CCANNNNN|NNNNTGG |
549 |
XmnI
| GAANN|NNTTC |
16, 479 |
Click here to view TAIR data
>AT4G21050.1 length:633
ATGGATAACT TGAATGTTTT CGCTAATGAA GACAATCAAG TGAATGGTTT | 50 |
GAAGCGTCCA CCCCCGTCAC GAGTGTGTCC AAGGTGTGAT TCTGATAACA | 100 |
CTAAGTTTTG CTTTTACAAC AACTACAGTG AATCTCAACC GCGCTACTTT | 150 |
TGCAAAAACT GTCGTAGATA TTGGACTCAT GGTGGAGCTT TAAGAAACAT | 200 |
ACCAGTTGGT GGAAGTTGTC GTAAACCAAA GCGTCTGAAG GTAGATCAAT | 250 |
CTTCGATTTC TGAGATGGTT TCTGTTGAGA ACCAACCAAT TAATCATCAA | 300 |
TCTTTCAGAC AAACTCAAGA AAACAATGAG TTTGTTCGAT CTTTTGACGC | 350 |
TTCTTCTTCT GCTACTGTTA CTGCCGTTCC GAACCATTTT GGTTATCTAA | 400 |
GTGAACTTCA TGGTGTAACA AATTTGCTTC CAATTCAAAG TTTTCGAACA | 450 |
ATGGACTGCT TAGATTTCGG TGATGAATCT TTTCAACAAG GTTATTACGA | 500 |
TGTTGGATCC AATGATTTGA TTGATAACCC TTTGATAAAC CAATCCATCG | 550 |
GTGGGTATGT TGATAATCTT ACAAGTTATT GCATAAATCA AGTGGAACCA | 600 |
AAGCTTCAAC CACGCTATGA ACATGAATCA TAA | 650 |
>AT4G21050.1 longest ORF length:210
MDNLNVFANE DNQVNGLKRP PPSRVCPRCD SDNTKFCFYN NYSESQPRYF | 50 |
CKNCRRYWTH GGALRNIPVG GSCRKPKRLK VDQSSISEMV SVENQPINHQ | 100 |
SFRQTQENNE FVRSFDASSS ATVTAVPNHF GYLSELHGVT NLLPIQSFRT | 150 |
MDCLDFGDES FQQGYYDVGS NDLIDNPLIN QSIGGYVDNL TSYCINQVEP | 200 |
KLQPRYEHES | 250 |
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