fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G21050 AtDof4,4 Dof-type zinc finger domain-containing protein (.1)

>AT4G21050.1 genomic map

>>Show CDS map




Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AclI, AfeI, AflII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, AscI, AvaI, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BmrI, BpmI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BssHII, BstEII, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MlyI, MnlI, MscI, MspA1I, , NarI, NciI, NcoI, NotI, PI-PspI, PI-SceI(VDE), PaeR7I, PleI, PmeI, PshAI, PspOMI, PstI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SpeI, StuI, SwaI, TliI, XhoI, XmaI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 3781
AccII(FnuDII) CG|CG 917, 989, 1492, 1755, 4137, 4900, 6046
AciI C|CGC 404, 829, 4136, 5600
AflIII A|CPuPyGT 1238, 1493, 2227, 2905, 2961, 3528, 3555, 3820, 4689, 6076
AhdI GACNNN|NNGTC 5560
AluI AG|CT 450, 592, 2346, 2778, 2922, 3144, 3542, 4183, 4599, 5623, 5717, 5787, 5953, 6101
ApaLI G|TGCAC 2152
ApoI Pu|AATTPy 954, 1668, 1793, 1888, 2487, 2972, 3186, 3584, 3715, 4419, 4912, 5285, 5336, 5352, 5682, 5805, 5991, 6022
AseI AT|TAAT 1256, 1686, 2034, 3395, 3619, 4288, 5102, 5160, 5273, 5309, 5360
AvaII G|G[AT]CC 369, 1961, 2020, 2105, 2144, 2289, 2762, 3225
AvrII C|CTAGG 1559
BamHI G|GATCC 4504
BclI T|GATCA 2313
BfaI C|TAG 389, 407, 413, 594, 1558, 1880, 2155, 2591, 2753, 2770, 2797, 2924, 3649, 5048, 5340, 5625
BglI GCCNNNN|NGGC 2819, 5491
BglII A|GATCT 1404, 2597
BlpI GC|TNAGC 3759
BsaAI PyAC|GTPu 135, 6077
BsaBI GATNN|NNATC 5983
BsaJI C|CNNGG 1559, 2163, 2539, 2862, 4078, 4928
BsiEI CGPuPy|CG 3172, 5984
BsiHKAI G[AT]GC[AT]|C 1499, 2028, 2152, 3522, 3549, 5693
BslI CCNNNNN|NNGG 855, 1564, 1700, 1908, 4206, 4549
Bsp1286I G[GAT]GC[CAT]|C 1499, 2028, 2152, 2167, 3522, 3549, 5693
BspDI AT|CGAT 5643
BspHI T|CATGA 3518
BsrDI GCAATGNN| 2423
BsrFI Pu|CCGGPy 1964, 2002, 5604
BsrGI T|GTACA 1842
BsrI ACTGGN| 3231
BssKI |CCNGG 774
BssSI C|TCGTG 1770
BstAPI GCANNNN|NTGC 1455, 3599
BstBI TT|CGAA 1665, 3196, 4442
BstF5I GGATGNN| 395, 629, 2510
BstNI CC|[AT]GG 774
BstUI CG|CG 917, 989, 1492, 1755, 4137, 4900, 6046
BstXI CCANNNNN|NTGG 526, 2758
BstYI Pu|GATCPy 723, 1404, 2597, 4504, 4655
Cac8I GCN|NGC 414, 1881, 2002, 2187, 2349, 2513, 3299, 4634
Cfr10I [AG]|CCGG[TC] 1964, 2002, 5604
ClaI AT|CGAT 5643
DdeI C|TNAG 293, 311, 800, 1090, 1189, 1303, 1315, 2177, 3344, 3758, 4099, 4258, 4395, 4457, 4667, 5116, 5279, 5470
DpnI GA-CH3|TC 471, 578, 722, 1403, 1952, 2221, 2280, 2312, 2596, 3171, 3924, 4241, 4335, 4503, 4654, 5015, 5983, 6043
DpnII |GATC 471, 578, 722, 1403, 1952, 2221, 2280, 2312, 2596, 3171, 3924, 4241, 4335, 4503, 4654, 5015, 5983, 6043
DraI TTT|AAA 13, 38, 3063, 5348, 5882, 6019
EaeI Py|GGCCPu 2812, 5493
EcoO109I PuG|GNCCPy 2021, 2145, 2763
EcoRI G|AATTC 1668, 2487
Fnu4HI GC|NGC 690
HaeIII GG|CC 1985, 1999, 2184, 2237, 2811, 5492
HhaI GCG|C 916, 4138
HinP1I G|CGC 916, 4138
HincII GTPy|PuAC 3211, 3735
HindIII A|AGCTT 3145, 4600, 5718
HinfI G|ANTC 362, 481, 782, 883, 969, 1360, 3218, 3476, 3704, 4086, 4128, 4172, 4473, 4623, 5255, 5645
HpaI GTT|AAC 3211, 3735
HpaII C|CGG 1963, 2001, 5603
Hpy188I TCN|GA 6, 546, 799, 966, 2310, 2315, 2680, 2719, 3008, 3345, 3792, 4089, 4232, 4257, 4303, 4376, 4668, 4715, 4842, 5138, 5471, 5534, 5648
Hpy99I CG[AT]CG| 3069
HpyCH4III ACN|GT 494, 677, 899, 2091, 3123, 3861, 4123, 4156, 4362, 5876, 6110
HpyCH4IV A|CGT 134, 860, 1236, 2829, 2903, 2959, 3820, 5559, 5582, 5689, 6076, 6119
HpyCH4V TG|CA 395, 629, 906, 979, 1456, 1784, 1897, 2151, 2418, 2634, 3094, 3591, 4148, 4577, 4774, 4814, 5611, 5763, 5833, 6113
MboI |GATC 471, 578, 722, 1403, 1952, 2221, 2280, 2312, 2596, 3171, 3924, 4241, 4335, 4503, 4654, 5015, 5983, 6043
MfeI C|AATTG 854
MluI A|CGCGT 1493
MseI T|TAA 12, 28, 37, 145, 260, 270, 357, 752, 867, 1210, 1255, 1373, 1434, 1464, 1642, 1685, 1706, 1711, 1834, 1853, 1858, 2033, 2117, 2329, 2974, 3062, 3210, 3262, 3305, 3357, 3394, 3399, 3487, 3614, 3618, 3636, 3687, 3734, 3815, 3868, 3952, 4187, 4287, 4707, 4721, 4825, 4856, 4893, 5101, 5109, 5143, 5159, 5241, 5272, 5304, 5308, 5329, 5347, 5355, 5359, 5382, 5424, 5514, 5523, 5607, 5724, 5819, 5881, 5892, 5899, 6018, 6089
MslI CAPyNN|NNPuTG 657, 2376, 2757, 2897, 3087, 4071
MspI C|CGG 1963, 2001, 5603
MwoI GCNNNNN|NNGC 914, 1455, 2165, 2786, 2819, 3599, 4147, 5491
N.BstNBI GAGTCNNNN|N 888, 3223
NaeI GCC|GGC 2002
NdeI CA|TATG 1635
NgoMIV G|CCGGC 2002
NheI G|CTAGC 414, 1881
NlaIII CATG| 316, 430, 484, 651, 879, 1957, 2015, 2226, 2429, 2616, 2726, 2785, 3081, 3298, 3517, 3527, 3554, 3589, 4175, 4406, 4619, 4688, 4776, 5800
NlaIV GGN|NCC 458, 680, 2020, 2145, 2762, 4504, 4593
NruI TCG|CGA 4901, 6047
NsiI ATGCA|T 396, 3095, 4775, 5764
NspI PuCATG|Py 2227, 2786, 3299, 3528, 3555, 3590, 4689
PacI TTAAT|TAA 3618, 5308, 5359
PciI A|CATGT 2227, 3528, 3555, 4689
PflFI GACN|NNGTC 2619
PflMI CCANNNN|NTGG 855, 4206
PmlI CAC|GTG 6077
PpuMI PuG|G[AT]CCPy 2021, 2145, 2763
PsiI TTA|TAA 63, 119, 424, 1112, 2884, 3388, 3483, 3831, 3947, 4805, 5711, 5926
PspGI |CC[AT]GG 774
PvuI CGAT|CG 3172, 5984
RsaI GT|AC 858, 1841, 1911, 3858
Sau3AI |GATC 471, 578, 722, 1403, 1952, 2221, 2280, 2312, 2596, 3171, 3924, 4241, 4335, 4503, 4654, 5015, 5983, 6043
Sau96I G|GNCC 369, 1961, 1986, 1999, 2020, 2105, 2144, 2184, 2237, 2289, 2762, 3225
ScrFI CC|NGG 774
SexAI A|CC[AT]GGT 775
SfcI C|TPuPyAG 686, 4122
SmlI C|TPyPuAG 1069, 3216, 3311, 3546, 4313, 4659
SnaBI TAC|GTA 135
SphI GCATG|C 3299
SspI AAT|ATT 24, 1739, 2365, 2547, 4838, 5148, 5157, 5887
StyI C|C[AT][AT]GG 1559, 2163, 2539, 2862, 4078, 4928
Taqƒ¿I T|CGA 610, 895, 1664, 1670, 1788, 2483, 2524, 2806, 3169, 3173, 3195, 3291, 4250, 4333, 4441, 4973, 5061, 5082, 5122, 5478, 5642
TfiI G|A[AT]TC 362, 481, 782, 969, 1360, 3476, 3704, 4086, 4128, 4473, 4623, 5255, 5645
TseI G|C[AT]GC 690
Tsp45I |GT[CG]AC 1489, 4064
Tsp509I |AATT 30, 65, 84, 121, 177, 197, 268, 342, 426, 853, 936, 953, 1371, 1431, 1644, 1667, 1683, 1792, 1821, 1836, 1856, 1887, 2035, 2322, 2387, 2486, 2527, 2971, 3136, 3165, 3185, 3264, 3282, 3384, 3392, 3396, 3485, 3503, 3583, 3616, 3620, 3714, 3810, 3919, 3949, 4285, 4418, 4429, 4858, 4865, 4883, 4911, 4962, 5099, 5103, 5141, 5161, 5226, 5270, 5284, 5306, 5335, 5351, 5357, 5361, 5391, 5408, 5521, 5681, 5783, 5804, 5817, 5846, 5901, 5990, 6000, 6021, 6039
TspRI NNCA[CG]TGNN| 3231, 4126
Tth111I GACN|NNGTC 2619
XbaI T|CTAGA 2592, 5341
XcmI CCANNNNN|NNNNTGG 526, 4548
XmnI GAANN|NNTTC 2323, 2532, 4015, 4478


Click here to view TAIR data

>AT4G21050 genomic sequence (4000-4632,) length:6132
ataaggtcag attttaaata ataaatattt taattttttt aaaacaaatc 
50
tttcatttct ctttataatt atttagtatt gtaataatta tatatacata 
100
tatatatata tatatatgtt ataattatga aacatacgta aggttattaa 
150
aagttatatt ggtgattatt agatagataa ttatattatt ttagaacaaa 
200
ttacacaaac cacaacgaca caaacttatt tttttggtat aacgacacaa 
250
acttcaataa cttaaaataa attaaaagaa cataaaagag aaactgagcc 
300
tccaaatgaa actgagacat gacttatttt attagaaaaa gagaattagg 
350
taatatagtt aagatTCAAG GACCACCCTT CTCTAAATGA CTAGGATGCA 
400
TCCTTCCGCT AGTGCTAGCG TTATTATAAT TCATGTTCAT AGCGTTATTG 
450
AAGCTCTGGT TCCAGTTGTA TTGATCCACT TGATTCATGT GATAACCGTT 
500
GTGATTATCA ACATATCCAC CAACTTGTTG GTTTACCAAA AGATTATCAG 
550
ACCCAACATC ATAATAATCT TGCTCAAATG ATCCATTATG GAAAGCTAGG 
600
CGATGATTTG GTCGAAAAGT TTGAGTTGGA TGCACATTTG TTACCATACC 
650
ACCATGAATA TGAGACAAAG AACTAAAACG GTTCCCTACA GCAGCAACAA 
700
AAGATGAAGA TGAAGCACCA AAAGATCCAA CAAAGTCATT ATTTTCTTGA 
750
ACATTAAAGA AAGGTTTATG GCTACCTGGT TGGATTCCAA CAGAAACCAT 
800
CTGAGCAACT GAAGGTTGAT TTATCCTTGT CCGCTTGGCA CGACTACTCC 
850
CACCAATTGG TACGTTTCTT AAAGCCCCAC CATGAGTCCA GTATCTTCGA 
900
CAGTTCTTGC AGAAGTAGCG CGGTTGAAAC TCACTATAAT TGTTGTAGTA 
950
ACAAAATTTT GTGTTATCAG AATCACATCT TGCACACACT CGCGGTGGGG 
1000
GTGGTGGAGG CTTCACATCA TTCACTTGAT TGTCTTCATT GGCAACAACA 
1050
TTGAAGTTAT CCATttttct caagaggttt ttgattttct cttagaaaga 
1100
aaagacagaa gttataagat gttgttgatg ttatgatatt tggtgttgtg 
1150
gagagtgtct tcttatatag gtttttgttt agtgaaaatc taagaagagt 
1200
atgttattgg gttaaaaaaa gtgagattat gagcaaaacg tgtcaaacat 
1250
tgtttattaa tcaaatctaa acatctatta cacaccataa atctttggct 
1300
aaacttagtc aaaaactaag gattttttat tctaactctt gtttgtatat 
1350
gagaaatggt gaatcaagat ataattaaat ggattagaca tataaactga 
1400
aaaagatcta aagatattga tagtgtaatg ataatttaag gtcaaacaag 
1450
catatattgc atatattaac tatgatagat atattatatg tgacgcgtgt 
1500
gctcacactc tatttcataa atacatatta tatgatttgc tcatatatag 
1550
aatagatacc tagggttgga acaaaaaaac atttagtagt caataataca 
1600
taatatcaag ataataggaa atctaaccat aatacatatg tttttaattg 
1650
aaaataacct atttttcgaa ttcgacaaaa acctaattaa tcaaccttta 
1700
tagggattta acttaataga gatttgttga gaaaataaaa tattatattt 
1750
gtccatcgcg tgaagttcac tcgtgttatt attggtgcat cgaaattttt 
1800
tgtcataaaa ctttattttg taaattacga ataccttaat ttgtacaatg 
1850
tctattaaat taaatagata tatagaaaat gctagcaaaa tttgtctttg 
1900
caccacttgt aggtacttta gacaaacaat acaacatcag tttttattca 
1950
tttgatctca tggaccggct ttagaggtaa ctcaatggcc ctacaatcag 
2000
ggccggctca acaaaacatg ggaccttgtg ctcattaatt ttgtttctaa 
2050
tatatgttct atatgtttag attttagttt gattatacac tactgtttgt 
2100
aaaatggacc ttgattgctt aaagaaaatg attgaaaaaa taaaggaccc 
2150
tgtgcactag caccaagggc acaccctcta agtcgggcct gcctacaatg 
2200
gctcaactaa ctcaacggat aagatcacat gtcttctggg ccttttctac 
2250
ttggtaatgt tagcgactac tgaagttgaa cgatcacacg gaccaaagcg 
2300
gtttcatatt tctgatcaga accaattctt ttaactatct tttttttagc 
2350
ttgctaaaaa ggtaaatatt tcataaaaat gaaaaaaaaa ttagaaatac 
2400
aataaaaatc atagacctat gcaatgttcc catgacaaaa aaaataaaaa 
2450
aaatggaagc gtatatgaaa aacacatttt catatcgaat tcttgaatat 
2500
gaatacgagg atgctggctt caatatcgaa ttatttcccc aaggtgaata 
2550
tttcttttct ccttttttta cccatctttg atgtaatcat atctagagat 
2600
ctccgtttgt tttttgacat ggtcttgtgg gcatttgcaa gttccaaaac 
2650
caacaaatgt gattttactc gctaaaaaca tcggagatga cattggttct 
2700
cgtctttatg gtatgtatat cagaggtcat ggtattctct catcccaatc 
2750
tccactagaa tgggaccttt cctagtgaaa gctctacatg ctttttgact 
2800
agcctattcg atggccgtaa tggctcacca acgtcttgac aataacaagc 
2850
agaagacaaa tccaagggag atttgatgtt tggttataaa cccatatata 
2900
tgtaacgtgt tttttgtcta tgaagctaga agatatgagg aatgaaaaaa 
2950
aagatatgta acgtgttcat aaaatttaac tgatgagaaa agaaagaaac 
3000
ctatgcgttc tgaagggtta ttgcttttta tgtattgctc tgttttcagt 
3050
ttttttctct gttttaaaac gacgcttcat ctcatgtatg tgagatgcat 
3100
tagtatataa ataagacaaa tctacggtta tttcttcaat tagtaagctt 
3150
tctttttgtc aatctcaatt tcgatcgacc attgaaaatt tgaacttcga 
3200
aggtcataaa gttaacttga gtcgtggacc actggtgttg aagattactt 
3250
ctttcattta tttttaattt tctattatga ttgaattgct tgtcgagagc 
3300
atgcgattaa ctcaagtcgc tcacacattt tttttttttg ttttctcaga 
3350
aatcattatt aaatcccgaa taaaactata aaagtaatta taaaattaat 
3400
ttaagtaaac ttggtattgg gtattgttgt ttactaaact ttttatgttc 
3450
aaaccatttt gtatatatgt aaagatgaat ctttataatt aaaaagaagt 
3500
aaataattac gcatatatca tgagcacaca tgttttgaca tagagcttga 
3550
gcacacatgt tttcacatac tctctctaat agtaaattta catgcaatat 
3600
atgcttggtt tgactttaat taattgccat tatactttta atatatgtcc 
3650
ctagattttt tttttctgtt tatatgtgat tttctcattt aatcatatct 
3700
acttgattct acaaaaattc acatacagac aagagttaac cattggtttt 
3750
tgactacgct tagcctaaag tttatggtgt gtagacagat tttcagattt 
3800
tattacacca caatttttaa cacgttttgc ttataatctc actctcctaa 
3850
atactgaaag tacagtttct taaatgtcca cgccccaaga acctataaga 
3900
atacaccttc cacaacacaa aattagatca taaaaacaac aagaacttat 
3950
aatttaagtc ttctctttct acgaaaaaat caagaacttc ttgaaaaaaA 
4000
TGGATAACTT GAATGTTTTC GCTAATGAAG ACAATCAAGT GAATGGTTTG 
4050
AAGCGTCCAC CCCCGTCACG AGTGTGTCCA AGGTGTGATT CTGATAACAC 
4100
TAAGTTTTGC TTTTACAACA ACTACAGTGA ATCTCAACCG CGCTACTTTT 
4150
GCAAAAACTG TCGTAGATAT TGGACTCATG GTGGAGCTTT AAGAAACATA 
4200
CCAGTTGGTG GAAGTTGTCG TAAACCAAAG CGTCTGAAGG TAGATCAATC 
4250
TTCGATTTCT GAGATGGTTT CTGTTGAGAA CCAACCAATT AATCATCAAT 
4300
CTTTCAGACA AACTCAAGAA AACAATGAGT TTGTTCGATC TTTTGACGCT 
4350
TCTTCTTCTG CTACTGTTAC TGCCGTTCCG AACCATTTTG GTTATCTAAG 
4400
TGAACTTCAT GGTGTAACAA ATTTGCTTCC AATTCAAAGT TTTCGAACAA 
4450
TGGACTGCTT AGATTTCGGT GATGAATCTT TTCAACAAGG TTATTACGAT 
4500
GTTGGATCCA ATGATTTGAT TGATAACCCT TTGATAAACC AATCCATCGG 
4550
TGGGTATGTT GATAATCTTA CAAGTTATTG CATAAATCAA GTGGAACCAA 
4600
AGCTTCAACC ACGCTATGAA CATGAATCAT AAagccagca gtagtggaag 
4650
cataggatct tgagacactc agaagaacaa tatgagaaac atgtttgttt 
4700
aggtcttctt aacattcgga agttaatgtt ccagtccatc gtttctactt 
4750
cttttttttt tattagtttc gtttatgcat ggtttatgtt gggtcttttt 
4800
ttagttataa aagtttgcat ctttgtttaa gtcccaaaat attcagacat 
4850
aagttgttta attcccaatt tctttgatgc ttgtaatttt ttttttaatc 
4900
tcgcgaaagc aaaattttag gctgatgcct tggcaaaaga ggtctcctcg 
4950
cttgtatgaa ctcaattctc taaatcgaat gaaaacaagg ttgtccaaaa 
5000
aaaaagaaag ttgtttgatc ctttttcctt tttatatata caataagaac 
5050
tagagatatt tctcgaacaa tctcaacacg agttcgattt ccgttgtgag 
5100
aattaattga ttaaacctta gtctcgattg tgaaatgttc agaattaaat 
5150
attatcaata ttaattctcc aaaagaaatc ctaaaatgtt agtagccaac 
5200
tataaagtag atatgtgaac caaaagaaat tgagattatt tattaaatat 
5250
atgacgaatc aacaatgatg taattaatac ttagaaattc gttgaaatct 
5300
atgttttaat taatacaaca tttatagtct ttaatgaatt tctagatttt 
5350
aaaattttaa ttaattattg aaaaatgtgt ttcttaataa ataattttat 
5400
tttataggta attatgacta tatggttaaa gacctaataa aaacataaat 
5450
gaatagttac aacttgctct ctcagatttt cgagagccaa aacggccact 
5500
ttcatagaca aaatcttaat gaaattaaag aaaatctgat ataacaagga 
5550
cattgacaaa acgtccagat tgtgttagta tagacgtgga ttatcataag 
5600
accgccggtt aatgcaaggg aaaaagctag attttgtcag tcatcgattc 
5650
cgacagagat agagatgagg tcttccacaa ggaatttgaa acgtgctcac 
5700
tctttccttt ttataataag ctttcttaac ttcattatcc ctatcgtttt 
5750
caaaagttgg caaatgcatt atcaccatat agtgaattag ctatatggtt 
5800
acatgaattt tttgagtgaa ttaactaacc atactgcatt tccttctaat 
5850
ttttgtttac ctccgtttca ttatatactg ttttaaaata tttttaactt 
5900
ttaattatat cgttatgaaa tacacttata agggtttttt ttttctattg 
5950
aataagctga aataataaca ataaaaatga ttacgatcgt aaatttggtg 
6000
taatttctat gtaatgcttt taaatttttg agacaaaata aattgatcgc 
6050
gacaaaacaa ataaagactt acactacacg tgtctataca ttaaatagca 
6100
aaagctattg acggtgcaaa acgtcaaaaa ca
6150