Locus |
Common name |
Short description |
AT4G21750 |
ATML1 |
MERISTEM LAYER 1, Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (.1.2) |
>AT4G21750.1 CDS map
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Uncut enzymes: AatII, Acc65I, AfeI, AflII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvrII, BaeI, BanI, BanII, BbsI, BbvI, BcgI, BciVI, BglII, BmrI, BpmI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspMI, BspT107I(HgiCI), BsrGI, BssHII, BstAPI, BstEII, BstZ17I, BtrI, BtsI, ClaI, DraI, DraIII, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MspA1I, NaeI, , NarI, NgoMIV, NheI, NotI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SpeI, SspI, StuI, SwaI, TliI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
957, 1599 |
AccII(FnuDII)
| CG|CG |
287, 533, 642, 1567 |
AccIII(BspMII)
| T|CCGGA |
1983, 2008 |
AciI
| C|CGC |
1139, 1426, 1683, 2190, 2262 |
AclI
| AA|CGTT |
1406, 1960 |
AflIII
| A|CPuPyGT |
14, 1361, 1880 |
AgeI
| A|CCGGT |
1384 |
AluI
| AG|CT |
153, 225, 279, 291, 296, 402, 475, 562, 615, 787, 807, 943, 1390, 1547, 1708, 1951 |
AlwNI
| CAGNNN|CTG |
382 |
AvaII
| G|G[AT]CC |
468, 915, 1918 |
BalI
| TGG|CCA |
1457 |
BamHI
| G|GATCC |
1609, 1700 |
BbvCI
| CC|TCAGC |
614 |
BclI
| T|GATCA |
2234 |
BfaI
| C|TAG |
227, 903, 1020, 1058, 1251, 1526, 2037 |
BglI
| GCCNNNN|NGGC |
2268 |
BlpI
| GC|TNAGC |
295 |
BsaAI
| PyAC|GTPu |
574 |
BsaBI
| GATNN|NNATC |
167, 1010 |
BsaHI
| GPu|CGPyC |
48 |
BsaJI
| C|CNNGG |
131, 1310, 1454, 1825 |
BsaWI
| [AT]|CCGG[AT] |
1384, 1558, 1983, 2008 |
BslI
| CCNNNNN|NNGG |
95, 462 |
BspEI
| T|CCGGA |
1983, 2008 |
BspHI
| T|CATGA |
971, 1628 |
BsrBI
| GAG|CGG |
1438, 2251 |
BsrDI
| GCAATGNN| |
801 |
BsrFI
| Pu|CCGGPy |
1384 |
BsrI
| ACTGGN| |
697, 829, 1075, 2128 |
BssKI
| |CCNGG |
82, 1585, 1653, 1665, 1824 |
BssSI
| C|TCGTG |
1154 |
BstBI
| TT|CGAA |
19 |
BstF5I
| GGATGNN| |
433, 1006, 1216, 1342, 1648, 2029 |
BstNI
| CC|[AT]GG |
1585, 1665, 1824 |
BstUI
| CG|CG |
287, 533, 642, 1567 |
BstXI
| CCANNNNN|NTGG |
1454 |
BstYI
| Pu|GATCPy |
162, 1609, 1700 |
Bsu36I
| CC|TNAGG |
1502 |
BtgI
| C|CPuPyGG |
131, 1454 |
Cac8I
| GCN|NGC |
290, 647, 1443, 1459, 1517, 1581, 2272 |
Cfr10I
| [AG]|CCGG[TC] |
1384 |
DdeI
| C|TNAG |
109, 282, 294, 299, 438, 613, 757, 1233, 1501, 1677, 1734, 1865, 1968 |
DpnI
| GA-CH3|TC |
161, 514, 653, 833, 936, 1246, 1347, 1478, 1608, 1649, 1699, 1820, 1885, 1979, 2233 |
DpnII
| |GATC |
161, 514, 653, 833, 936, 1246, 1347, 1478, 1608, 1649, 1699, 1820, 1885, 1979, 2233 |
DrdI
| GACNNNN|NNGTC |
1596, 1624 |
EaeI
| Py|GGCCPu |
1457 |
EcoO109I
| PuG|GNCCPy |
1919 |
Fnu4HI
| GC|NGC |
474, 564, 724, 795, 1139, 1439, 1683, 2262 |
FspI
| TGC|GCA |
1578 |
HaeII
| PuGCGC|Py |
1681 |
HaeIII
| GG|CC |
1456, 2269 |
HhaI
| GCG|C |
117, 643, 1566, 1577, 1680 |
HinP1I
| G|CGC |
117, 643, 1566, 1577, 1680 |
HincII
| GTPy|PuAC |
1572, 1599, 2176 |
HindIII
| A|AGCTT |
297, 944 |
HinfI
| G|ANTC |
21, 137, 218, 231, 284, 550, 869, 954, 974, 995, 1010, 1055, 1283, 1496, 1561, 1849, 2011, 2178 |
HpaII
| C|CGG |
81, 114, 470, 1383, 1469, 1557, 1652, 1982, 2007, 2024, 2076 |
Hpy188I
| TCN|GA |
60, 390, 406, 756, 939, 1244, 1280, 1611, 1735, 2165, 2231 |
Hpy99I
| CG[AT]CG| |
497, 1613, 2276 |
HpyCH4III
| ACN|GT |
199, 460, 960, 1177, 1189, 1195, 1370, 2154, 2220, 2244 |
HpyCH4IV
| A|CGT |
573, 896, 1405, 1617, 1959 |
HpyCH4V
| TG|CA |
793, 1104, 1293, 1399, 2240 |
MboI
| |GATC |
161, 514, 653, 833, 936, 1246, 1347, 1478, 1608, 1649, 1699, 1820, 1885, 1979, 2233 |
MscI
| TGG|CCA |
1457 |
MseI
| T|TAA |
509, 587, 1377, 2256 |
MslI
| CAPyNN|NNPuTG |
346 |
MspI
| C|CGG |
81, 114, 470, 1383, 1469, 1557, 1652, 1982, 2007, 2024, 2076 |
MwoI
| GCNNNNN|NNGC |
295, 564, 795, 1398, 1575, 1806, 2268 |
N.BstNBI
| GAGTCNNNN|N |
236, 289, 959, 1501, 1566, 1854 |
NciI
| CC|[CG]GG |
82, 1653 |
NcoI
| C|CATGG |
131, 1454 |
NdeI
| CA|TATG |
34 |
NlaIII
| CATG| |
13, 130, 359, 450, 970, 1317, 1360, 1453, 1516, 1580, 1627, 1642, 1879 |
NlaIV
| GGN|NCC |
86, 326, 1609, 1700, 1918, 2074, 2281 |
NruI
| TCG|CGA |
288 |
NspI
| PuCATG|Py |
14, 451, 1361, 1517, 1581, 1880 |
PciI
| A|CATGT |
14, 1361, 1880 |
PflFI
| GACN|NNGTC |
111, 1241 |
PflMI
| CCANNNN|NTGG |
462 |
PpuMI
| PuG|G[AT]CCPy |
1919 |
PspGI
| |CC[AT]GG |
1585, 1665, 1824 |
RsaI
| GT|AC |
424, 1174, 1554, 1902 |
SalI
| G|TCGAC |
1599 |
Sau3AI
| |GATC |
161, 514, 653, 833, 936, 1246, 1347, 1478, 1608, 1649, 1699, 1820, 1885, 1979, 2233 |
Sau96I
| G|GNCC |
468, 915, 1918 |
ScrFI
| CC|NGG |
82, 1585, 1653, 1665, 1824 |
SfcI
| C|TPuPyAG |
479, 1706, 2219 |
SmlI
| C|TPyPuAG |
1749 |
SnaBI
| TAC|GTA |
574 |
SphI
| GCATG|C |
1517, 1581 |
StyI
| C|C[AT][AT]GG |
131, 1310, 1454 |
Taqƒ¿I
| T|CGA |
18, 39, 102, 495, 516, 746, 1598, 1725, 1846, 2247 |
TfiI
| G|A[AT]TC |
21, 137, 218, 550, 869, 974, 995, 1010, 1283, 2011 |
TseI
| G|C[AT]GC |
474, 564, 724, 795 |
Tsp45I
| |GT[CG]AC |
126, 202, 1192, 1314 |
Tsp509I
| |AATT |
596, 857, 910, 1290 |
TspRI
| NNCA[CG]TGNN| |
697, 1192, 2068, 2245 |
Tth111I
| GACN|NNGTC |
111, 1241 |
XbaI
| T|CTAGA |
1059 |
XcmI
| CCANNNNN|NNNNTGG |
1784 |
XmnI
| GAANN|NNTTC |
155, 308 |
Click here to view TAIR data
>AT4G21750.1 length:2289
ATGTATCATC CAAACATGTT CGAATCTCAT CATCATATGT TCGATATGAC | 50 |
GCCGAAAAAC TCCGAAAACG ATTTGGGTAT CACCGGGAGC CACGAAGAGG | 100 |
ATTTCGAGAC TAAGTCCGGC GCAGAAGTCA CCATGGAGAA TCCTTTAGAA | 150 |
GAAGAGCTTC AAGATCCTAA TCAGCGTCCC AACAAAAAGA AGCGTTACCA | 200 |
CCGTCACACA CAACGCCAGA TTCAAGAGCT AGAGTCGTTC TTCAAGGAAT | 250 |
GTCCTCATCC AGACGATAAG CAAAGAAAGG AGCTGAGTCG CGAGCTAAGC | 300 |
TTAGAACCTC TTCAAGTCAA GTTTTGGTTC CAAAACAAAC GCACTCAAAT | 350 |
GAAGGCACAA CATGAGAGGC ACGAGAACCA GATACTGAAG TCAGAAAATG | 400 |
ACAAGCTCCG AGCAGAGAAC AATAGGTACA AGGATGCTCT AAGCAACGCA | 450 |
ACATGCCCAA ACTGTGGTGG TCCGGCAGCT ATAGGAGAAA TGTCCTTCGA | 500 |
CGAACAGCAT TTAAGGATCG AAAATGCTCG TTTACGCGAA GAGATTGACA | 550 |
GAATCTCTGC CATAGCTGCT AAATACGTAG GGAAGCCTTT AATGGCTAAT | 600 |
TCCTCTTCTT TCCCTCAGCT CTCTTCTTCA CACCACATTC CCTCGCGCTC | 650 |
GCTTGATCTT GAAGTTGGGA ACTTTGGGAA CAATAACAAT AGCCACACTG | 700 |
GTTTCGTTGG GGAAATGTTT GGAAGCAGCG ACATTTTGAG GTCGGTTTCG | 750 |
ATACCTTCTG AGGCTGATAA GCCTATGATT GTTGAGTTAG CTGTTGCAGC | 800 |
AATGGAAGAG CTTGTGAGAA TGGCTCAAAC TGGTGATCCC TTATGGGTTT | 850 |
CAAGCGATAA TTCTGTTGAG ATTCTCAATG AAGAAGAGTA TTTTAGGACG | 900 |
TTTCCTAGAG GAATTGGACC GAAACCTATC GGTTTGAGAT CAGAAGCTTC | 950 |
AAGAGAGTCT ACTGTTGTTA TCATGAATCA TATCAATCTC ATTGAGATTC | 1000 |
TAATGGATGT GAATCAATGG TCTAGTGTGT TCTGCGGGAT TGTATCAAGA | 1050 |
GCATTGACTC TAGAAGTTCT CTCAACTGGC GTAGCAGGGA ACTACAATGG | 1100 |
GGCATTGCAA GTGATGACAG CAGAGTTCCA AGTCCCATCG CCGCTTGTCC | 1150 |
CTACTCGTGA GAACTACTTT GTAAGGTACT GTAAACAGCA CAGTGACGGT | 1200 |
ATTTGGGCGG TTGTGGATGT CTCTTTGGAC AGCCTAAGAC CAAGTCCGAT | 1250 |
CACTAGAAGC AGAAGAAGAC CCTCTGGTTG TCTGATTCAA GAATTGCAGA | 1300 |
ATGGTTACTC CAAGGTGACA TGGGTAGAGC ATATTGAGGT GGATGATAGA | 1350 |
TCGGTTCACA ACATGTATAA ACCGTTGGTT AATACCGGTT TAGCTTTCGG | 1400 |
TGCAAAACGT TGGGTGGCTA CACTTGACCG CCAATGTGAG CGGCTCGCCA | 1450 |
GTTCCATGGC CAGCAACATT CCGGCTTGTG ATCTTTCCGT GATAACGAGT | 1500 |
CCTGAGGGGA GAAAGAGCAT GCTGAAACTA GCGGAGAGAA TGGTGATGAG | 1550 |
CTTCTGTACC GGAGTCGGCG CGTCAACTGC GCATGCCTGG ACTACATTGT | 1600 |
CGACCACAGG ATCCGACGAC GTTCGGGTCA TGACCCGAAA GAGCATGGAT | 1650 |
GATCCGGGAA GACCTCCAGG CATCGTTCTC AGCGCCGCTA CTTCTTTCTG | 1700 |
GATCCCTGTA GCTCCAAAAC GAGTGTTCGA TTTTCTCAGA GATGAAAACT | 1750 |
CAAGAAGCGA GTGGGATATA CTTTCCAATG GAGGCTTGGT TCAAGAAATG | 1800 |
GCTCATATCG CAAATGGTCG TGATCCTGGG AATAGTGTCT CCTTGCTTCG | 1850 |
AGTCAATAGT GGGAACTCAG GGCAGAGCAA CATGTTGATC TTACAAGAAA | 1900 |
GTTGTACGGA CGCATCAGGG TCCTATGTGA TATACGCACC AGTTGATATA | 1950 |
ATAGCTATGA ACGTTGTCCT GAGTGGTGGT GATCCGGATT ATGTCGCTTT | 2000 |
GTTACCATCC GGATTCGCTA TTTTGCCGGA TGGCTCTGCT AGAGGAGGAG | 2050 |
GAGGTAGTGC TAATGCCAGT GCTGGAGCCG GAGTTGAAGG AGGAGGAGAG | 2100 |
GGGAATAATC TTGAAGTGGT TACTACTACT GGGAGTTGTG GCGGTTCACT | 2150 |
ACTCACAGTT GCGTTTCAGA TACTTGTTGA CTCTGTTCCT ACCGCTAAAC | 2200 |
TCTCTCTCGG TTCAGTTGCT ACAGTCAATA GTCTGATCAA ATGCACTGTC | 2250 |
GAGCGGATTA AAGCCGCTCT GGCCTGCGAC GGAGCCTAA | 2300 |
>AT4G21750.1 longest ORF length:762
MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE | 50 |
EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS | 100 |
LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA | 150 |
TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN | 200 |
SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS | 250 |
IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT | 300 |
FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR | 350 |
ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG | 400 |
IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR | 450 |
SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS | 500 |
PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD | 550 |
DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM | 600 |
AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI | 650 |
IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE | 700 |
GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV | 750 |
ERIKAALACD GA | 800 |
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