fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G21750 ATML1 MERISTEM LAYER 1, Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (.1.2)

>AT4G21750.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NheI, NotI, PacI, PstI, PvuII, SacI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 1609, 1700
HindIII A|AGCTT 297, 944
NcoI C|CATGG 131, 1454
NdeI CA|TATG 34
SalI G|TCGAC 1599
StyI C|C[AT][AT]GG 131, 1310, 1454
XbaI T|CTAGA 1059


Click here to view TAIR data

>AT4G21750.1 length:2289
ATGTATCATC CAAACATGTT CGAATCTCAT CATCATATGT TCGATATGAC 
50
GCCGAAAAAC TCCGAAAACG ATTTGGGTAT CACCGGGAGC CACGAAGAGG 
100
ATTTCGAGAC TAAGTCCGGC GCAGAAGTCA CCATGGAGAA TCCTTTAGAA 
150
GAAGAGCTTC AAGATCCTAA TCAGCGTCCC AACAAAAAGA AGCGTTACCA 
200
CCGTCACACA CAACGCCAGA TTCAAGAGCT AGAGTCGTTC TTCAAGGAAT 
250
GTCCTCATCC AGACGATAAG CAAAGAAAGG AGCTGAGTCG CGAGCTAAGC 
300
TTAGAACCTC TTCAAGTCAA GTTTTGGTTC CAAAACAAAC GCACTCAAAT 
350
GAAGGCACAA CATGAGAGGC ACGAGAACCA GATACTGAAG TCAGAAAATG 
400
ACAAGCTCCG AGCAGAGAAC AATAGGTACA AGGATGCTCT AAGCAACGCA 
450
ACATGCCCAA ACTGTGGTGG TCCGGCAGCT ATAGGAGAAA TGTCCTTCGA 
500
CGAACAGCAT TTAAGGATCG AAAATGCTCG TTTACGCGAA GAGATTGACA 
550
GAATCTCTGC CATAGCTGCT AAATACGTAG GGAAGCCTTT AATGGCTAAT 
600
TCCTCTTCTT TCCCTCAGCT CTCTTCTTCA CACCACATTC CCTCGCGCTC 
650
GCTTGATCTT GAAGTTGGGA ACTTTGGGAA CAATAACAAT AGCCACACTG 
700
GTTTCGTTGG GGAAATGTTT GGAAGCAGCG ACATTTTGAG GTCGGTTTCG 
750
ATACCTTCTG AGGCTGATAA GCCTATGATT GTTGAGTTAG CTGTTGCAGC 
800
AATGGAAGAG CTTGTGAGAA TGGCTCAAAC TGGTGATCCC TTATGGGTTT 
850
CAAGCGATAA TTCTGTTGAG ATTCTCAATG AAGAAGAGTA TTTTAGGACG 
900
TTTCCTAGAG GAATTGGACC GAAACCTATC GGTTTGAGAT CAGAAGCTTC 
950
AAGAGAGTCT ACTGTTGTTA TCATGAATCA TATCAATCTC ATTGAGATTC 
1000
TAATGGATGT GAATCAATGG TCTAGTGTGT TCTGCGGGAT TGTATCAAGA 
1050
GCATTGACTC TAGAAGTTCT CTCAACTGGC GTAGCAGGGA ACTACAATGG 
1100
GGCATTGCAA GTGATGACAG CAGAGTTCCA AGTCCCATCG CCGCTTGTCC 
1150
CTACTCGTGA GAACTACTTT GTAAGGTACT GTAAACAGCA CAGTGACGGT 
1200
ATTTGGGCGG TTGTGGATGT CTCTTTGGAC AGCCTAAGAC CAAGTCCGAT 
1250
CACTAGAAGC AGAAGAAGAC CCTCTGGTTG TCTGATTCAA GAATTGCAGA 
1300
ATGGTTACTC CAAGGTGACA TGGGTAGAGC ATATTGAGGT GGATGATAGA 
1350
TCGGTTCACA ACATGTATAA ACCGTTGGTT AATACCGGTT TAGCTTTCGG 
1400
TGCAAAACGT TGGGTGGCTA CACTTGACCG CCAATGTGAG CGGCTCGCCA 
1450
GTTCCATGGC CAGCAACATT CCGGCTTGTG ATCTTTCCGT GATAACGAGT 
1500
CCTGAGGGGA GAAAGAGCAT GCTGAAACTA GCGGAGAGAA TGGTGATGAG 
1550
CTTCTGTACC GGAGTCGGCG CGTCAACTGC GCATGCCTGG ACTACATTGT 
1600
CGACCACAGG ATCCGACGAC GTTCGGGTCA TGACCCGAAA GAGCATGGAT 
1650
GATCCGGGAA GACCTCCAGG CATCGTTCTC AGCGCCGCTA CTTCTTTCTG 
1700
GATCCCTGTA GCTCCAAAAC GAGTGTTCGA TTTTCTCAGA GATGAAAACT 
1750
CAAGAAGCGA GTGGGATATA CTTTCCAATG GAGGCTTGGT TCAAGAAATG 
1800
GCTCATATCG CAAATGGTCG TGATCCTGGG AATAGTGTCT CCTTGCTTCG 
1850
AGTCAATAGT GGGAACTCAG GGCAGAGCAA CATGTTGATC TTACAAGAAA 
1900
GTTGTACGGA CGCATCAGGG TCCTATGTGA TATACGCACC AGTTGATATA 
1950
ATAGCTATGA ACGTTGTCCT GAGTGGTGGT GATCCGGATT ATGTCGCTTT 
2000
GTTACCATCC GGATTCGCTA TTTTGCCGGA TGGCTCTGCT AGAGGAGGAG 
2050
GAGGTAGTGC TAATGCCAGT GCTGGAGCCG GAGTTGAAGG AGGAGGAGAG 
2100
GGGAATAATC TTGAAGTGGT TACTACTACT GGGAGTTGTG GCGGTTCACT 
2150
ACTCACAGTT GCGTTTCAGA TACTTGTTGA CTCTGTTCCT ACCGCTAAAC 
2200
TCTCTCTCGG TTCAGTTGCT ACAGTCAATA GTCTGATCAA ATGCACTGTC 
2250
GAGCGGATTA AAGCCGCTCT GGCCTGCGAC GGAGCCTAA
2300

>AT4G21750.1 longest ORF length:762
MYHPNMFESH HHMFDMTPKN SENDLGITGS HEEDFETKSG AEVTMENPLE 
50
EELQDPNQRP NKKKRYHRHT QRQIQELESF FKECPHPDDK QRKELSRELS 
100
LEPLQVKFWF QNKRTQMKAQ HERHENQILK SENDKLRAEN NRYKDALSNA 
150
TCPNCGGPAA IGEMSFDEQH LRIENARLRE EIDRISAIAA KYVGKPLMAN 
200
SSSFPQLSSS HHIPSRSLDL EVGNFGNNNN SHTGFVGEMF GSSDILRSVS 
250
IPSEADKPMI VELAVAAMEE LVRMAQTGDP LWVSSDNSVE ILNEEEYFRT 
300
FPRGIGPKPI GLRSEASRES TVVIMNHINL IEILMDVNQW SSVFCGIVSR 
350
ALTLEVLSTG VAGNYNGALQ VMTAEFQVPS PLVPTRENYF VRYCKQHSDG 
400
IWAVVDVSLD SLRPSPITRS RRRPSGCLIQ ELQNGYSKVT WVEHIEVDDR 
450
SVHNMYKPLV NTGLAFGAKR WVATLDRQCE RLASSMASNI PACDLSVITS 
500
PEGRKSMLKL AERMVMSFCT GVGASTAHAW TTLSTTGSDD VRVMTRKSMD 
550
DPGRPPGIVL SAATSFWIPV APKRVFDFLR DENSRSEWDI LSNGGLVQEM 
600
AHIANGRDPG NSVSLLRVNS GNSGQSNMLI LQESCTDASG SYVIYAPVDI 
650
IAMNVVLSGG DPDYVALLPS GFAILPDGSA RGGGGSANAS AGAGVEGGGE 
700
GNNLEVVTTT GSCGGSLLTV AFQILVDSVP TAKLSLGSVA TVNSLIKCTV 
750
ERIKAALACD GA
800