fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G22770 AT hook motif DNA-binding family protein (.1)

>AT4G22770.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 282
NheI G|CTAGC 709
StyI C|C[AT][AT]GG 232


Click here to view TAIR data

>AT4G22770.1 length:1005
ATGGAGACTA CCGGAGAAGT TGTTAAAACA ACCACCGGGA GCGACGGAGG 
50
CGTTACGGTG GTGAGATCCA ACGCGCCGTC AGACTTCCAC ATGGCTCCGA 
100
GGTCAGAAAC TTCAAACACA CCTCCCAACT CCGTCGCTCC TCCTCCTCCT 
150
CCACCGCCGC AAAACTCCTT TACTCCGTCG GCGGCTATGG ATGGTTTCTC 
200
AAGCGGACCG ATAAAGAAGA GACGTGGGCG CCCTAGGAAG TACGGACACG 
250
ACGGAGCAGC GGTGACGCTA TCTCCGAATC CGATATCATC AGCCGCACCA 
300
ACGACTTCTC ACGTCATCGA TTTCTCGACG ACATCGGAGA AACGTGGCAA 
350
AATGAAACCA GCAACTCCAA CTCCAAGCTC ATTCATCAGG CCAAAGTACC 
400
AGGTCGAGAA TTTAGGTGAA TGGTCTCCTT CCTCTGCCGC CGCTAATTTC 
450
ACGCCGCATA TTATTACGGT GAATGCAGGC GAGGACGTTA CGAAGAGGAT 
500
AATATCATTT TCTCAACAAG GGTCTCTAGC TATTTGCGTT TTATGCGCAA 
550
ACGGTGTCGT TTCGAGCGTT ACACTTCGTC AGCCTGATTC ATCTGGTGGT 
600
ACATTGACCT ATGAGGGTCG GTTTGAGATA TTGTCACTAT CTGGAACATT 
650
CATGCCTAGT GACTCAGACG GGACACGAAG CAGAACAGGC GGGATGAGCG 
700
TGTCGCTTGC TAGCCCTGAT GGACGTGTAG TAGGTGGTGG TGTTGCTGGC 
750
TTGCTGGTTG CAGCCACTCC TATTCAAGTG GTTGTAGGAA CTTTCTTAGG 
800
TGGAACAAAC CAGCAAGAAC AGACACCGAA GCCGCATAAC CACAACTTCA 
850
TGTCTTCTCC ATTAATGCCA ACTTCTTCGA ATGTAGCTGA TCATCGAACC 
900
ATCCGTCCCA TGACATCTAG TCTCCCGATC AGTACATGGA CACCGTCTTT 
950
TCCTTCTGAT TCACGACACA AGCATTCTCA TGACTTTAAT ATCACTTTGA 
1000
CGTGA
1050

>AT4G22770.1 longest ORF length:334
METTGEVVKT TTGSDGGVTV VRSNAPSDFH MAPRSETSNT PPNSVAPPPP 
50
PPPQNSFTPS AAMDGFSSGP IKKRRGRPRK YGHDGAAVTL SPNPISSAAP 
100
TTSHVIDFST TSEKRGKMKP ATPTPSSFIR PKYQVENLGE WSPSSAAANF 
150
TPHIITVNAG EDVTKRIISF SQQGSLAICV LCANGVVSSV TLRQPDSSGG 
200
TLTYEGRFEI LSLSGTFMPS DSDGTRSRTG GMSVSLASPD GRVVGGGVAG 
250
LLVAATPIQV VVGTFLGGTN QQEQTPKPHN HNFMSSPLMP TSSNVADHRT 
300
IRPMTSSLPI STWTPSFPSD SRHKHSHDFN ITLT
350