fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G22810 Predicted AT-hook DNA-binding family protein (.1)

>AT4G22810.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 3, 337


Click here to view TAIR data

>AT4G22810.1 length:975
ATGGATCCAG TACAATCTCA TGGATCACAA AGCTCTCTAC CTCCTCCTTT 
50
CCACGCAAGA GACTTTCAAT TACATCTTCA ACAACAGCAA CAAGAGTTCT 
100
TCCTCCACCA TCACCAGCAA CAAAGAAACC AAACCGATGG TGACCAACAA 
150
GGAGGATCAG GAGGAAACCG ACAAATCAAG ATGGATCGTG AAGAGACAAG 
200
CGACAACATA GACAACATAG CTAACAACAG CGGTAGTGAA GGTAAAGACA 
250
TAGATATACA CGGTGGTTCA GGAGAAGGAG GTGGTGGCTC CGGAGGAGAT 
300
CATCAGATGA CAAGAAGACC AAGAGGAAGA CCAGCGGGAT CCAAGAACAA 
350
ACCAAAACCA CCGATTATCA TCACACGGGA CAGCGCAAAC GCGCTTAGAA 
400
CCCACGTGAT GGAGATCGGA GATGGCTGCG ACTTAGTCGA AAGCGTTGCC 
450
ACTTTTGCAC GAAGACGCCA ACGCGGCGTT TGCGTTATGA GCGGTACTGG 
500
AAATGTTACT AACGTCACTA TACGTCAGCC TGGATCTCAT CCTTCTCCTG 
550
GCTCGGTAGT TAGTCTTCAC GGAAGGTTCG AGATTCTATC TCTCTCAGGA 
600
TCTTTTCTCC CTCCTCCGGC TCCTCCTACA GCCACCGGAT TGAGTGTTTA 
650
CCTCGCTGGA GGACAAGGAC AGGTGGTTGG AGGAAGCGTA GTTGGTCCGT 
700
TGTTATGTGC TGGTCCTGTC GTTGTCATGG CTGCGTCTTT TAGCAATGCG 
750
GCGTACGAAA GGTTGCCTTT AGAGGAAGAT GAGATGCAGA CGCCGGTTCA 
800
TGGCGGAGGA GGAGGAGGAT CATTGGAGTC GCCGCCAATG ATGGGACAAC 
850
AACTGCAACA TCAGCAACAA GCTATGTCAG GTCATCAAGG GTTACCACCT 
900
AATCTTCTTG GTTCGGTTCA GTTGCAGCAG CAACATGATC AGTCTTATTG 
950
GTCAACGGGA CGACCACCGT ATTGA
1000

>AT4G22810.1 longest ORF length:324
MDPVQSHGSQ SSLPPPFHAR DFQLHLQQQQ QEFFLHHHQQ QRNQTDGDQQ 
50
GGSGGNRQIK MDREETSDNI DNIANNSGSE GKDIDIHGGS GEGGGGSGGD 
100
HQMTRRPRGR PAGSKNKPKP PIIITRDSAN ALRTHVMEIG DGCDLVESVA 
150
TFARRRQRGV CVMSGTGNVT NVTIRQPGSH PSPGSVVSLH GRFEILSLSG 
200
SFLPPPAPPT ATGLSVYLAG GQGQVVGGSV VGPLLCAGPV VVMAASFSNA 
250
AYERLPLEED EMQTPVHGGG GGGSLESPPM MGQQLQHQQQ AMSGHQGLPP 
300
NLLGSVQLQQ QHDQSYWSTG RPPY
350