Locus |
Common name |
Short description |
AT4G24060 |
AtDof4,6 |
Dof-type zinc finger DNA-binding family protein (.1) |
>AT4G24060.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AvaI, AvrII, BaeI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstBI, BstEII, BstNI, BstUI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, ClaI, DraI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, RsaI, RsrII, SacI, SacII, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
928 |
AciI
| C|CGC |
74, 80, 86, 95 |
AgeI
| A|CCGGT |
439 |
AluI
| AG|CT |
151, 373, 970 |
ApoI
| Pu|AATTPy |
454, 657, 666 |
AseI
| AT|TAAT |
922, 934 |
AvaII
| G|G[AT]CC |
259, 514 |
BalI
| TGG|CCA |
16 |
BclI
| T|GATCA |
396 |
BfaI
| C|TAG |
767 |
BglII
| A|GATCT |
319, 477 |
BsaBI
| GATNN|NNATC |
788 |
BsaJI
| C|CNNGG |
41, 608 |
BsaWI
| [AT]|CCGG[AT] |
439 |
BslI
| CCNNNNN|NNGG |
114, 294, 711 |
BspHI
| T|CATGA |
413 |
BsrFI
| Pu|CCGGPy |
439 |
BsrI
| ACTGGN| |
997 |
BstF5I
| GGATGNN| |
507, 1002 |
BstXI
| CCANNNNN|NTGG |
543 |
BstYI
| Pu|GATCPy |
319, 477, 627, 702 |
BtgI
| C|CPuPyGG |
608 |
Cfr10I
| [AG]|CCGG[TC] |
439 |
DdeI
| C|TNAG |
10, 276 |
DpnI
| GA-CH3|TC |
146, 318, 395, 476, 626, 701, 731, 782, 1014 |
DpnII
| |GATC |
146, 318, 395, 476, 626, 701, 731, 782, 1014 |
EaeI
| Py|GGCCPu |
16 |
EcoRI
| G|AATTC |
657 |
Fnu4HI
| GC|NGC |
74, 98, 221, 969 |
HaeIII
| GG|CC |
15, 135 |
HincII
| GTPy|PuAC |
928 |
HinfI
| G|ANTC |
360 |
HpaII
| C|CGG |
438 |
Hpy188I
| TCN|GA |
164, 336, 357, 393, 944 |
Hpy99I
| CG[AT]CG| |
109 |
HpyCH4III
| ACN|GT |
107, 160 |
HpyCH4IV
| A|CGT |
977 |
HpyCH4V
| TG|CA |
236, 726, 746, 967 |
MboI
| |GATC |
146, 318, 395, 476, 626, 701, 731, 782, 1014 |
MscI
| TGG|CCA |
16 |
MseI
| T|TAA |
921, 933 |
MslI
| CAPyNN|NNPuTG |
418, 797 |
MspA1I
| C[AC]G|C[GT]G |
971 |
MspI
| C|CGG |
438 |
MwoI
| GCNNNNN|NNGC |
80, 95 |
NcoI
| C|CATGG |
608 |
NlaIII
| CATG| |
63, 412, 418, 500, 597, 607, 676, 806, 1017 |
NspI
| PuCATG|Py |
64, 419 |
PvuII
| CAG|CTG |
971 |
SalI
| G|TCGAC |
928 |
Sau3AI
| |GATC |
146, 318, 395, 476, 626, 701, 731, 782, 1014 |
Sau96I
| G|GNCC |
259, 514 |
SmlI
| C|TPyPuAG |
303, 460 |
StyI
| C|C[AT][AT]GG |
41, 608 |
Taqƒ¿I
| T|CGA |
927 |
TfiI
| G|A[AT]TC |
360 |
TseI
| G|C[AT]GC |
98, 221, 969 |
Tsp509I
| |AATT |
206, 453, 482, 656, 665, 891, 919 |
TspRI
| NNCA[CG]TGNN| |
14, 526, 765 |
Click here to view TAIR data
>AT4G24060.1 length:1029
ATGGATACGG CTCAGTGGCC ACAGGAGATT GTAGTGAAGC CCTTGGAAGA | 50 |
AATAGTAACA AACACATGCC CAAAGCCGCA ACCGCAACCG CTTCAACCGC | 100 |
AGCAGCCACC GTCGGTGGGT GGAGAGAGGA AGGCAAGGCC AGAAAAGGAT | 150 |
CAAGCTGTAA ACTGTCCGAG ATGTAACTCA ACCAACACAA AGTTTTGTTA | 200 |
CTACAACAAT TATAGTTTGA CGCAGCCAAG ATACTTCTGC AAAGGTTGTA | 250 |
GAAGGTATTG GACCGAAGGC GGTTCGCTTA GGAACATTCC TGTTGGCGGT | 300 |
GGCTCAAGAA AGAACAAGAG ATCTCACTCT TCTTCTTCTG ATATTAGTAA | 350 |
CAATCACTCG GATTCTACAC AACCAGCTAC AAAGAAGCAT CTCTCTGATC | 400 |
ATCACCACCA CCTCATGAGC ATGTCTCAAC AAGGTTTGAC CGGTCAAAAC | 450 |
CCTAAATTCC TTGAGACGAC CCAACAAGAT CTCAATTTAG GTTTTTCACC | 500 |
ACATGGGATG ATTAGGACCA ACTTCACTGA CCTCATCCAC AACATTGGCA | 550 |
ACAACACCAA CAAGAGCAAC AACAATAACA ATCCATTGAT TGTTTCTTCA | 600 |
TGTTCTGCCA TGGCTACTTC TTCTCTGGAT CTCATAAGAA ACAATAGTAA | 650 |
CAATGGGAAT TCTTCAAATT CTTCCTTCAT GGGATTTCCA GTTCATAATC | 700 |
AAGATCCAGC ATCAGGAGGG TTTTCAATGC AAGATCATTA CAAGCCTTGC | 750 |
AACACAAACA CCACACTGCT AGGGTTTTCA TTAGATCATC ATCATAATAA | 800 |
TGGATTTCAT GGAGGGTTTC AAGGAGGAGA AGAAGGTGGA GAAGGTGGTG | 850 |
ATGATGTGAA TGGAAGGCAC TTGTTTCCTT TTGAGGATTT GAAATTGCCA | 900 |
GTTTCTTCTT CATCAGCAAC AATTAATGTC GACATTAATG AACATCAGAA | 950 |
GCGAGGAAGC GGTAGTGATG CAGCTGCTAC GTCTGGTGGG TATTGGACTG | 1000 |
GGATGTTGAG TGGAGGATCA TGGTGCTAA | 1050 |
>AT4G24060.1 longest ORF length:342
MDTAQWPQEI VVKPLEEIVT NTCPKPQPQP LQPQQPPSVG GERKARPEKD | 50 |
QAVNCPRCNS TNTKFCYYNN YSLTQPRYFC KGCRRYWTEG GSLRNIPVGG | 100 |
GSRKNKRSHS SSSDISNNHS DSTQPATKKH LSDHHHHLMS MSQQGLTGQN | 150 |
PKFLETTQQD LNLGFSPHGM IRTNFTDLIH NIGNNTNKSN NNNNPLIVSS | 200 |
CSAMATSSLD LIRNNSNNGN SSNSSFMGFP VHNQDPASGG FSMQDHYKPC | 250 |
NTNTTLLGFS LDHHHNNGFH GGFQGGEEGG EGGDDVNGRH LFPFEDLKLP | 300 |
VSSSSATINV DINEHQKRGS GSDAAATSGG YWTGMLSGGS WC | 350 |
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