Locus |
Common name |
Short description |
AT4G24150 |
ATGRF8 |
growth-regulating factor 8 (.1) |
>AT4G24150.1 CDS map
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Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaHI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstUI, BstZ17I, Bsu36I, BtrI, ClaI, DraI, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HindIII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, N.BstNBI, NaeI, , NarI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PvuI, RsrII, SacII, SapI, SbfI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
28, 97, 1165 |
AciI
| C|CGC |
342 |
AluI
| AG|CT |
114, 395, 442, 454, 468, 528, 687, 915, 1078, 1086, 1110, 1172, 1277, 1457, 1469, 1475 |
AlwNI
| CAGNNN|CTG |
656 |
ApoI
| Pu|AATTPy |
177, 1140 |
AvaII
| G|G[AT]CC |
1359, 1392 |
BanII
| GPuGCPy|C |
396, 1111 |
BclI
| T|GATCA |
795, 1005 |
BfaI
| C|TAG |
297, 777, 909, 1440, 1452 |
BsaAI
| PyAC|GTPu |
25 |
BsaBI
| GATNN|NNATC |
1133 |
BsaJI
| C|CNNGG |
736 |
BsiHKAI
| G[AT]GC[AT]|C |
396, 774, 1111 |
BsiWI
| C|GTACG |
892 |
BslI
| CCNNNNN|NNGG |
578 |
Bsp1286I
| G[GAT]GC[CAT]|C |
396, 774, 1111 |
BsrFI
| Pu|CCGGPy |
346 |
BssKI
| |CCNGG |
572, 1064, 1386 |
BstF5I
| GGATGNN| |
6, 577, 648 |
BstNI
| CC|[AT]GG |
1386 |
BstXI
| CCANNNNN|NTGG |
1176 |
BstYI
| Pu|GATCPy |
378, 962 |
BtgI
| C|CPuPyGG |
736 |
BtsI
| GCAGTGNN| |
666 |
Cac8I
| GCN|NGC |
68, 709, 914 |
Cfr10I
| [AG]|CCGG[TC] |
346 |
DdeI
| C|TNAG |
898, 934, 1020 |
DpnI
| GA-CH3|TC |
278, 377, 725, 794, 961, 1004, 1098, 1133 |
DpnII
| |GATC |
278, 377, 725, 794, 961, 1004, 1098, 1133 |
DraIII
| CACNNN|GTG |
1388 |
Fnu4HI
| GC|NGC |
360, 441, 686, 1459 |
HhaI
| GCG|C |
705 |
HinP1I
| G|CGC |
705 |
HincII
| GTPy|PuAC |
97 |
HinfI
| G|ANTC |
17, 626, 788, 855, 1070, 1123 |
HpaII
| C|CGG |
345, 572, 1064 |
Hpy188I
| TCN|GA |
797, 1136, 1283 |
HpyCH4III
| ACN|GT |
259, 325, 369, 651, 657, 805, 1238, 1409 |
HpyCH4IV
| A|CGT |
24, 189, 783 |
HpyCH4V
| TG|CA |
439, 684, 743, 1185, 1460 |
MboI
| |GATC |
278, 377, 725, 794, 961, 1004, 1098, 1133 |
MseI
| T|TAA |
1058, 1196 |
MslI
| CAPyNN|NNPuTG |
741, 881 |
MspA1I
| C[AC]G|C[GT]G |
688, 1087 |
MspI
| C|CGG |
345, 572, 1064 |
MwoI
| GCNNNNN|NNGC |
441, 476, 705, 1154, 1468 |
NciI
| CC|[CG]GG |
572, 1064 |
NcoI
| C|CATGG |
736 |
NdeI
| CA|TATG |
1001 |
NlaIII
| CATG| |
283, 464, 499, 735, 848, 1309, 1352, 1365 |
NlaIV
| GGN|NCC |
732, 1054 |
NspI
| PuCATG|Py |
849 |
PspGI
| |CC[AT]GG |
1386 |
PstI
| CTGCA|G |
1461 |
PvuII
| CAG|CTG |
688, 1087 |
RsaI
| GT|AC |
496, 891, 1443 |
SacI
| GAGCT|C |
396, 1111 |
SalI
| G|TCGAC |
97 |
Sau3AI
| |GATC |
278, 377, 725, 794, 961, 1004, 1098, 1133 |
Sau96I
| G|GNCC |
1359, 1392 |
ScaI
| AGT|ACT |
1444 |
ScrFI
| CC|NGG |
572, 1064, 1386 |
SexAI
| A|CC[AT]GGT |
1387 |
SfcI
| C|TPuPyAG |
371, 1461 |
SmlI
| C|TPyPuAG |
58, 393, 472, 1073, 1473 |
SnaBI
| TAC|GTA |
25 |
SpeI
| A|CTAGT |
1453 |
StyI
| C|C[AT][AT]GG |
736 |
Taqƒ¿I
| T|CGA |
96, 1125 |
TfiI
| G|A[AT]TC |
17, 626, 788, 855, 1123 |
TseI
| G|C[AT]GC |
360, 441, 686, 1459 |
Tsp45I
| |GT[CG]AC |
366 |
Tsp509I
| |AATT |
176, 1139 |
TspRI
| NNCA[CG]TGNN| |
328, 666, 1343, 1410 |
XbaI
| T|CTAGA |
778 |
XcmI
| CCANNNNN|NNNNTGG |
1095 |
Click here to view TAIR data
>AT4G24150.1 length:1482
ATGAGGATGC TTCTTGGGAT TCCTTACGTA GACAAGTCGG TTCTTTCCAA | 50 |
CTCTGTTCTT GAGAGAGGCA AGCAGGATAA AAGCAAACTA TTGTTAGTCG | 100 |
ACAAATGCCA TTATGAGCTT GATGTTGAAG AACGCAAGGA AGATTTTGTT | 150 |
GGTGGGTTTG GATTTGGTGT TGTAGAAAAT TCGCATAAAG ACGTTATGGT | 200 |
GCTACCTCAT CATCACTATT ATCCATCATA TTCATCACCT TCCTCTTCTT | 250 |
CTTTGTGTTA CTGTTCTGCT GGTGTTAGCG ATCCCATGTT CTCTGTTTCT | 300 |
AGCAATCAGG CTTACACTTC TTCTCACAGT GGTATGTTCA CACCCGCCGG | 350 |
TTCTGGTTCT GCTGCTGTGA CTGTAGCAGA TCCTTTTTTC TCCTTGAGCT | 400 |
CTTCAGGGGA AATGAGAAGA AGTATGAACG AAGATGCTGG TGCAGCTTTC | 450 |
AGCGAAGCTC AATGGCATGA GCTTGAGAGG CAGAGGAATA TATACAAGTA | 500 |
CATGATGGCT TCTGTTCCTG TTCCTCCAGA GCTTCTCACA CCCTTTCCCA | 550 |
AGAACCACCA ATCAAACACT AACCCGGATG TGGATACATA TAGGAGTGGA | 600 |
ATGTTTAGTA TTTATGCTGA TTACAAGAAT CTGCCGTTGT CTATGTGGAT | 650 |
GACAGTAACT GTGGCAGTGG CGACAGGAGG CTCATTGCAG CTGGGGATTG | 700 |
CTTCAAGCGC AAGCAATAAC ACGGCTGATC TGGAGCCATG GAGGTGCAAG | 750 |
AGAACAGATG GGAAGAAATG GAGGTGCTCT AGAAACGTGA TTCCTGATCA | 800 |
GAAATACTGT GAGAGACACA CACACAAGAG CCGTCCTCGT TCAAGAAAGC | 850 |
ATGTGGAATC ATCTCACCAA TCATCTCACC ACAATGACAT TCGTACGGCT | 900 |
AAGAATGATA CTAGCCAGCT TGTGAGAACT TATCCTCAGT TTTACGGACA | 950 |
ACCTATAAGC CAGATCCCTG TGCTTTCTAC TCTTCCGTCT GCCTCCTCTC | 1000 |
CATATGATCA CCACAGAGGA CTGAGGTGGT TTACGAAAGA AGATGATGCC | 1050 |
ATTGGAACCT TAAACCCGGA GACTCAAGAA GCTGTCCAGC TGAAAGTTGG | 1100 |
ATCAAGCAGA GAGCTCAAAC GGGGATTCGA TTATGATCTG AATTTCAGGC | 1150 |
AGAAAGAGCC AATAGTAGAC CAGAGCTTTG GAGCATTGCA GGGTCTATTA | 1200 |
AGTCTAAACC AGACACCACA ACATAACCAA GAAACAAGAC AGTTTGTTGT | 1250 |
AGAAGGAAAG CAAGATGAAG CGATGGGAAG CTCTCTGACA CTCTCAATGG | 1300 |
CTGGAGGAGG CATGGAGGAA ACAGAGGGAA CAAACCAGCA TCAGTGGGTT | 1350 |
AGCCATGAAG GTCCATCATG GCTCTATTCA ACAACACCAG GTGGACCATT | 1400 |
GGCTGAAGCA CTGTGTCTCG GTGTCTCCAA CAACCCAAGT TCTAGTACTA | 1450 |
CTACTAGTAG CTGCAGCAGA AGCTCAAGCT AA | 1500 |
>AT4G24150.1 longest ORF length:493
MRMLLGIPYV DKSVLSNSVL ERGKQDKSKL LLVDKCHYEL DVEERKEDFV | 50 |
GGFGFGVVEN SHKDVMVLPH HHYYPSYSSP SSSSLCYCSA GVSDPMFSVS | 100 |
SNQAYTSSHS GMFTPAGSGS AAVTVADPFF SLSSSGEMRR SMNEDAGAAF | 150 |
SEAQWHELER QRNIYKYMMA SVPVPPELLT PFPKNHQSNT NPDVDTYRSG | 200 |
MFSIYADYKN LPLSMWMTVT VAVATGGSLQ LGIASSASNN TADLEPWRCK | 250 |
RTDGKKWRCS RNVIPDQKYC ERHTHKSRPR SRKHVESSHQ SSHHNDIRTA | 300 |
KNDTSQLVRT YPQFYGQPIS QIPVLSTLPS ASSPYDHHRG LRWFTKEDDA | 350 |
IGTLNPETQE AVQLKVGSSR ELKRGFDYDL NFRQKEPIVD QSFGALQGLL | 400 |
SLNQTPQHNQ ETRQFVVEGK QDEAMGSSLT LSMAGGGMEE TEGTNQHQWV | 450 |
SHEGPSWLYS TTPGGPLAEA LCLGVSNNPS SSTTTSSCSR SSS | 500 |
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