fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G24470 GATA25, TIFY1, ZIM Zinc-finger protein expressed in Inflorescence Meristem, GATA TRANSCRIPTION FACTOR 25, GATA-type zinc finger protein with TIFY domain (.1.2.3)

>AT4G24470.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
KpnI GGTAC|C 40
NcoI C|CATGG 878
NdeI CA|TATG 391
StyI C|C[AT][AT]GG 446, 878


Click here to view TAIR data

>AT4G24470.2 length:930
ATGTTTGGTC GCCATTCGAT TATCCCAAAT AACCAGATTG GTACCGCCTC 
50
TGCTTCCGCT GGTGAAGACC ATGTCTCTGC CTCCGCTACG TCTGGTCACA 
100
TTCCTTACGA CGATATGGAA GAAATCCCTC ATCCTGACTC TATCTATGGT 
150
GCTGCCTCCG ATTTGATTCC CGATGGCTCT CAATTGGTTG CTCACCGATC 
200
CGATGGCTCT GAATTACTTG TTTCTCGGCC ACCGGAAGGG GCGAATCAGC 
250
TTACGATCTC GTTCCGTGGA CAAGTTTACG TTTTTGATGC CGTTGGTGCT 
300
GACAAGGTGG ATGCTGTGTT GTCGCTGTTG GGTGGTTCTA CTGAGCTTGC 
350
TCCTGGTCCG CAGGTGATGG AACTAGCTCA ACAGCAGAAT CATATGCCTG 
400
TTGTAGAATA TCAGAGCCGC TGTAGCCTTC CGCAACGGGC ACAATCCTTG 
450
GATAGGTTTC GGAAGAAGAG GAATGCTAGA TGTTTCGAGA AGAAAGTAAG 
500
ATACGGTGTT CGCCAAGAAG TTGCCTTAAG AATGGCACGT AATAAAGGTC 
550
AATTCACCTC TTCAAAGATG ACAGATGGGG CTTATAACTC TGGCACAGAT 
600
CAAGATTCTG CCCAAGATGA TGCCCATCCA GAAATATCGT GTACTCATTG 
650
CGGCATTAGT TCCAAATGTA CACCAATGAT GCGACGTGGC CCTTCCGGCC 
700
CCAGGACTCT CTGCAATGCC TGTGGACTTT TTTGGGCTAA CAGGGGTACA 
750
TTGAGGGATC TCTCAAAGAA AACAGAAGAG AATCAGTTGG CTTTAATGAA 
800
ACCGGATGAT GGTGGGAGTG TTGCTGATGC TGCTAACAAC TTAAACACTG 
850
AAGCTGCAAG TGTTGAAGAA CACACTTCCA TGGTTTCTCT TGCCAATGGG 
900
GATAATTCTA ATCTGTTAGG TGATCACTAA 
950

>AT4G24470.2 longest ORF length:309
MFGRHSIIPN NQIGTASASA GEDHVSASAT SGHIPYDDME EIPHPDSIYG 
50
AASDLIPDGS QLVAHRSDGS ELLVSRPPEG ANQLTISFRG QVYVFDAVGA 
100
DKVDAVLSLL GGSTELAPGP QVMELAQQQN HMPVVEYQSR CSLPQRAQSL 
150
DRFRKKRNAR CFEKKVRYGV RQEVALRMAR NKGQFTSSKM TDGAYNSGTD 
200
QDSAQDDAHP EISCTHCGIS SKCTPMMRRG PSGPRTLCNA CGLFWANRGT 
250
LRDLSKKTEE NQLALMKPDD GGSVADAANN LNTEAASVEE HTSMVSLANG 
300
DNSNLLGDH
350