Locus |
Common name |
Short description |
AT4G24470 |
GATA25, TIFY1, ZIM |
Zinc-finger protein expressed in Inflorescence Meristem, GATA TRANSCRIPTION FACTOR 25, GATA-type zinc finger protein with TIFY domain (.1.2.3) |
>AT4G24470.2 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
KpnI
| GGTAC|C |
40 |
NcoI
| C|CATGG |
878 |
NdeI
| CA|TATG |
391 |
StyI
| C|C[AT][AT]GG |
446, 878 |
Click here to view TAIR data
>AT4G24470.2 length:930
ATGTTTGGTC GCCATTCGAT TATCCCAAAT AACCAGATTG GTACCGCCTC | 50 |
TGCTTCCGCT GGTGAAGACC ATGTCTCTGC CTCCGCTACG TCTGGTCACA | 100 |
TTCCTTACGA CGATATGGAA GAAATCCCTC ATCCTGACTC TATCTATGGT | 150 |
GCTGCCTCCG ATTTGATTCC CGATGGCTCT CAATTGGTTG CTCACCGATC | 200 |
CGATGGCTCT GAATTACTTG TTTCTCGGCC ACCGGAAGGG GCGAATCAGC | 250 |
TTACGATCTC GTTCCGTGGA CAAGTTTACG TTTTTGATGC CGTTGGTGCT | 300 |
GACAAGGTGG ATGCTGTGTT GTCGCTGTTG GGTGGTTCTA CTGAGCTTGC | 350 |
TCCTGGTCCG CAGGTGATGG AACTAGCTCA ACAGCAGAAT CATATGCCTG | 400 |
TTGTAGAATA TCAGAGCCGC TGTAGCCTTC CGCAACGGGC ACAATCCTTG | 450 |
GATAGGTTTC GGAAGAAGAG GAATGCTAGA TGTTTCGAGA AGAAAGTAAG | 500 |
ATACGGTGTT CGCCAAGAAG TTGCCTTAAG AATGGCACGT AATAAAGGTC | 550 |
AATTCACCTC TTCAAAGATG ACAGATGGGG CTTATAACTC TGGCACAGAT | 600 |
CAAGATTCTG CCCAAGATGA TGCCCATCCA GAAATATCGT GTACTCATTG | 650 |
CGGCATTAGT TCCAAATGTA CACCAATGAT GCGACGTGGC CCTTCCGGCC | 700 |
CCAGGACTCT CTGCAATGCC TGTGGACTTT TTTGGGCTAA CAGGGGTACA | 750 |
TTGAGGGATC TCTCAAAGAA AACAGAAGAG AATCAGTTGG CTTTAATGAA | 800 |
ACCGGATGAT GGTGGGAGTG TTGCTGATGC TGCTAACAAC TTAAACACTG | 850 |
AAGCTGCAAG TGTTGAAGAA CACACTTCCA TGGTTTCTCT TGCCAATGGG | 900 |
GATAATTCTA ATCTGTTAGG TGATCACTAA | 950 |
>AT4G24470.2 longest ORF length:309
MFGRHSIIPN NQIGTASASA GEDHVSASAT SGHIPYDDME EIPHPDSIYG | 50 |
AASDLIPDGS QLVAHRSDGS ELLVSRPPEG ANQLTISFRG QVYVFDAVGA | 100 |
DKVDAVLSLL GGSTELAPGP QVMELAQQQN HMPVVEYQSR CSLPQRAQSL | 150 |
DRFRKKRNAR CFEKKVRYGV RQEVALRMAR NKGQFTSSKM TDGAYNSGTD | 200 |
QDSAQDDAHP EISCTHCGIS SKCTPMMRRG PSGPRTLCNA CGLFWANRGT | 250 |
LRDLSKKTEE NQLALMKPDD GGSVADAANN LNTEAASVEE HTSMVSLANG | 300 |
DNSNLLGDH | 350 |
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