fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G25410 bHLH126 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT4G25410.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BamHI G|GATCC 3, 360, 376
HindIII A|AGCTT 130, 473
SacI GAGCT|C 531
StyI C|C[AT][AT]GG 339
XhoI C|TCGAG 496


Click here to view TAIR data

>AT4G25410.1 length:693
ATGGATCCTT ATAAGAATCT TAATCCAAAA GGTTACCAGA GACAGAGACC 
50
GTTTAGCTCA GCCGGCGAGA GTGGCGGCAG CGGCGGCTCC GGTACGGCCC 
100
ATGAAACAGA TGACAATAAG AAGAAGAAGA AGCTTCTCCA CCGCGACATC 
150
GAACGCCAAA GAAGACAAGA AATGGCTACA CTCTTTGCTA CTCTTCGTAC 
200
TCACTTACCT CTTAAATACA TCAAGGGAAA AAGAGCTGTG TCGGATCATG 
250
TAAATGGAGC GGTAAATTTC ATTAAGGACA CGGAAGCACG GATTAAAGAA 
300
CTTAGTGCAA GAAGAGACGA GTTAAGTAGA GAAACCGGCC AAGGATATAA 
350
ATCGAATCCG GATCCAGGAA AAACTGGATC CGATGTAGGC AAATCGGAGC 
400
CGGCGACTGT GATGGTGCAA CCACACGTGA GCGGTTTAGA AGTGGTAGTG 
450
AGCAGCAACT CCTCAGGCCC CGAAGCTTTG CCACTATCAA AAGTGCTCGA 
500
GACAATTCAG GAGAAAGGGC TTGAAGTCAT GAGCTCCTTC ACTACAAGAG 
550
TCAATGATAG GCTCATGCAC ACTATTCAAG TAGAGGTTAA TAGTTTCGGA 
600
TGCATAGACT TATTATGGTT GCAGCAGAAG CTAGTTGAGG ATTTGATACT 
650
TTCGACGGGA AAAAATCAAA GTCTTCTTGA AATTTCGTTA TGA
700

>AT4G25410.1 longest ORF length:230
MDPYKNLNPK GYQRQRPFSS AGESGGSGGS GTAHETDDNK KKKKLLHRDI 
50
ERQRRQEMAT LFATLRTHLP LKYIKGKRAV SDHVNGAVNF IKDTEARIKE 
100
LSARRDELSR ETGQGYKSNP DPGKTGSDVG KSEPATVMVQ PHVSGLEVVV 
150
SSNSSGPEAL PLSKVLETIQ EKGLEVMSSF TTRVNDRLMH TIQVEVNSFG 
200
CIDLLWLQQK LVEDLILSTG KNQSLLEISL 
250