Locus |
Common name |
Short description |
AT4G25410 |
bHLH126 |
basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
>AT4G25410.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
3, 360, 376 |
HindIII
| A|AGCTT |
130, 473 |
SacI
| GAGCT|C |
531 |
StyI
| C|C[AT][AT]GG |
339 |
XhoI
| C|TCGAG |
496 |
Click here to view TAIR data
>AT4G25410.1 length:693
ATGGATCCTT ATAAGAATCT TAATCCAAAA GGTTACCAGA GACAGAGACC | 50 |
GTTTAGCTCA GCCGGCGAGA GTGGCGGCAG CGGCGGCTCC GGTACGGCCC | 100 |
ATGAAACAGA TGACAATAAG AAGAAGAAGA AGCTTCTCCA CCGCGACATC | 150 |
GAACGCCAAA GAAGACAAGA AATGGCTACA CTCTTTGCTA CTCTTCGTAC | 200 |
TCACTTACCT CTTAAATACA TCAAGGGAAA AAGAGCTGTG TCGGATCATG | 250 |
TAAATGGAGC GGTAAATTTC ATTAAGGACA CGGAAGCACG GATTAAAGAA | 300 |
CTTAGTGCAA GAAGAGACGA GTTAAGTAGA GAAACCGGCC AAGGATATAA | 350 |
ATCGAATCCG GATCCAGGAA AAACTGGATC CGATGTAGGC AAATCGGAGC | 400 |
CGGCGACTGT GATGGTGCAA CCACACGTGA GCGGTTTAGA AGTGGTAGTG | 450 |
AGCAGCAACT CCTCAGGCCC CGAAGCTTTG CCACTATCAA AAGTGCTCGA | 500 |
GACAATTCAG GAGAAAGGGC TTGAAGTCAT GAGCTCCTTC ACTACAAGAG | 550 |
TCAATGATAG GCTCATGCAC ACTATTCAAG TAGAGGTTAA TAGTTTCGGA | 600 |
TGCATAGACT TATTATGGTT GCAGCAGAAG CTAGTTGAGG ATTTGATACT | 650 |
TTCGACGGGA AAAAATCAAA GTCTTCTTGA AATTTCGTTA TGA | 700 |
>AT4G25410.1 longest ORF length:230
MDPYKNLNPK GYQRQRPFSS AGESGGSGGS GTAHETDDNK KKKKLLHRDI | 50 |
ERQRRQEMAT LFATLRTHLP LKYIKGKRAV SDHVNGAVNF IKDTEARIKE | 100 |
LSARRDELSR ETGQGYKSNP DPGKTGSDVG KSEPATVMVQ PHVSGLEVVV | 150 |
SSNSSGPEAL PLSKVLETIQ EKGLEVMSSF TTRVNDRLMH TIQVEVNSFG | 200 |
CIDLLWLQQK LVEDLILSTG KNQSLLEISL | 250 |
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