fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT4G25440 ZFWD1 zinc finger WD40 repeat protein 1 (.1)

>AT4G25440.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NotI, PacI, SacI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 472
NcoI C|CATGG 851
NheI G|CTAGC 1056
PstI CTGCA|G 889
PvuII CAG|CTG 776
SalI G|TCGAC 1272
SmaI CCC|GGG 1207
StyI C|C[AT][AT]GG 851


Click here to view TAIR data

>AT4G25440.1 length:1293
ATGGATTTAG ATATGAACGG AGGAAACAAG AGAGTCTTTC AAAGACTGGG 
50
CGGTGGCTCT AATCGGCCGA CGACGGACTC AAATCAGAAG GTTTGTTTCC 
100
ACTGGCGAGC TGGCCGGTGC AATCGTTACC CATGCCCTTA CCTGCATAGA 
150
GAATTGCCGG GTCCGGGTTC GGGTCCAGTA GCAGCTTCTT CAAATAAAAG 
200
GGTCGCTGAT GAATCTGGGT TTGCGGGTCC GAGTCACCGG AGAGGGCCTG 
250
GGTTCAGCGG GACTGCTAAT AACTGGGGAA GATTTGGTGG GAACAGAACG 
300
GTGACCAAGA CGGAGAAACT TTGCAAATTC TGGGTTGATG GAAATTGCCC 
350
TTATGGTGAT AAATGTAGAT ACTTGCATTG CTGGAGCAAA GGAGATAGTT 
400
TCTCCTTGTT GACGCAGCTT GACGGGCATC AGAAGGTTGT TACTGGGATT 
450
GCTCTGCCTT CAGGATCAGA TAAGCTTTAC ACGGCGAGTA AAGATGAAAC 
500
TGTGCGAATA TGGGATTGTG CTTCTGGACA GTGTACAGGT GTACTCAATC 
550
TTGGTGGGGA AGTTGGCTGC ATCATTAGTG AAGGTCCCTG GCTATTGGTT 
600
GGCATGCCAA ATCTTGTTAA GGCGTGGAAT ATCCAAAACA ATGCAGACCT 
650
GAGCCTCAAT GGACCTGTTG GCCAAGTATA TTCATTGGTT GTGGGTACTG 
700
ATCTATTGTT CGCTGGCACA CAAGATGGCT CTATTTTGGT TTGGAGATAC 
750
AATAGCACCA CTAGCTGTTT TGATCCAGCT GCATCACTAT TGGGTCACAC 
800
GCTTGCAGTT GTCTCTTTAT ATGTTGGGGC AAACAGACTC TATTCTGGTG 
850
CCATGGACAA TTCTATAAAA GTTTGGAGCC TGGATAATCT GCAGTGTATT 
900
CAAACGCTTA CAGAGCATAC ATCAGTTGTT ATGTCTCTCA TTTGCTGGGA 
950
TCAGTTTCTT CTGTCATGTT CATTGGACAA TACCGTCAAG ATATGGGCTG 
1000
CTACTGAAGG TGGAAACTTA GAAGTGACAT ATACTCACAA AGAAGAATAC 
1050
GGCGTGCTAG CTCTCTGTGG CGTCCATGAT GCAGAAGCCA AGCCAGTATT 
1100
GCTATGTTCG TGCAATGACA ATTCGTTGCA CCTCTATGAT TTGCCATCGT 
1150
TTACGGAAAG GGGCAAAATT TTAGCTAAGC AAGAGATTCG GTCAATCCAG 
1200
ATAGGTCCCG GGGGCATATT TTTCACCGGT GATGGAAGTG GTCAAGTTAA 
1250
AGTATGGAAG TGGTCTACTG AGTCGACCCC TATTTTGTCT TGA
1300

>AT4G25440.1 longest ORF length:430
MDLDMNGGNK RVFQRLGGGS NRPTTDSNQK VCFHWRAGRC NRYPCPYLHR 
50
ELPGPGSGPV AASSNKRVAD ESGFAGPSHR RGPGFSGTAN NWGRFGGNRT 
100
VTKTEKLCKF WVDGNCPYGD KCRYLHCWSK GDSFSLLTQL DGHQKVVTGI 
150
ALPSGSDKLY TASKDETVRI WDCASGQCTG VLNLGGEVGC IISEGPWLLV 
200
GMPNLVKAWN IQNNADLSLN GPVGQVYSLV VGTDLLFAGT QDGSILVWRY 
250
NSTTSCFDPA ASLLGHTLAV VSLYVGANRL YSGAMDNSIK VWSLDNLQCI 
300
QTLTEHTSVV MSLICWDQFL LSCSLDNTVK IWAATEGGNL EVTYTHKEEY 
350
GVLALCGVHD AEAKPVLLCS CNDNSLHLYD LPSFTERGKI LAKQEIRSIQ 
400
IGPGGIFFTG DGSGQVKVWK WSTESTPILS 
450